RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 GDF7Q7Z4P5 450 aa17■□□□□ 0.31
NUP50-218ENST00000493456 DNAJC22Q8N4W6 341 aa17■□□□□ 0.31
NUP50-218ENST00000493456 OR13C4Q8NGS5 318 aa17■□□□□ 0.31
NUP50-218ENST00000493456 RELTQ969Z4 430 aa17■□□□□ 0.31
NUP50-218ENST00000493456 SLC26A1Q9H2B4 701 aa17■□□□□ 0.31
NUP50-218ENST00000493456 SLC22A11Q9NSA0 550 aa17■□□□□ 0.31
NUP50-218ENST00000493456 ZDHHC3Q9NYG2 299 aa17■□□□□ 0.31
NUP50-218ENST00000493456 POLG2Q9UHN1 485 aa17■□□□□ 0.31
NUP50-218ENST00000493456 NXT1Q9UKK6 140 aaKnown RBP17■□□□□ 0.31
NUP50-218ENST00000493456 A0A1B0GX78 115 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 KDM1AO60341 852 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 ONECUT2O95948 504 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 CTSBP07858 339 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 GCGRP47871 477 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 ASTE1Q2TB18 679 aaPredicted RBP16.99■□□□□ 0.31
NUP50-218ENST00000493456 TUBB8Q3ZCM7 444 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 KAZNQ674X7 775 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 ITPRIPL1Q6GPH6 555 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 OVCH1Q7RTY7 1134 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 TBC1D21Q8IYX1 336 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 OR5AR1Q8NGP9 310 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 FLVCR1-AS1Q8TAF5 88 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 TRIM56Q9BRZ2 755 aaKnown RBP16.99■□□□□ 0.31
NUP50-218ENST00000493456 SPHK1Q9NYA1 384 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 ASF1AQ9Y294 204 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 HS3ST3B1Q9Y662 390 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 MDC1Q14676 2089 aaKnown RBP16.99■□□□□ 0.31
NUP50-218ENST00000493456 ANKRD12Q6UB98 2062 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 NF1P21359 2839 aa16.99■□□□□ 0.31
NUP50-218ENST00000493456 HIVEP1P15822 2718 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 LIN7AO14910 233 aaPredicted RBP16.98■□□□□ 0.31
NUP50-218ENST00000493456 PSTPIP1O43586 416 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 SPOPO43791 374 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 ALOX12BO75342 701 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 JRKO75564 520 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 TNNT1P13805 278 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 ALAS2P22557 587 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 ADRA1AP35348 466 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 MFAP5Q13361 173 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 KIR2DS3Q14952 304 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 INAQ16352 499 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 NKG7Q16617 165 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 TFDP3Q5H9I0 405 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 KIRREL2Q6UWL6 708 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 ISLR2Q6UXK2 745 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 TMEM151BQ8IW70 566 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 LMF1Q96S06 567 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 SPSB2Q99619 263 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 FERMT1Q9BQL6 677 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 GORASP1Q9BQQ3 440 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 FAM96AQ9H5X1 160 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 SEMA3GQ9NS98 782 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 EURLQ9NYK6 297 aa16.98■□□□□ 0.31
NUP50-218ENST00000493456 AAR2Q9Y312 384 aaKnown RBP16.98■□□□□ 0.31
NUP50-218ENST00000493456 ZGRF1Q86YA3 2104 aa16.97■□□□□ 0.31
NUP50-218ENST00000493456 TRBV5-4A0A0C4DH59 114 aa16.97■□□□□ 0.31
NUP50-218ENST00000493456 AKR1B10O60218 316 aa16.97■□□□□ 0.31
NUP50-218ENST00000493456 AP2A2O94973 939 aa16.97■□□□□ 0.31
NUP50-218ENST00000493456 ITGAXP20702 1163 aa16.97■□□□□ 0.31
NUP50-218ENST00000493456 MC4RP32245 332 aa16.97■□□□□ 0.31
NUP50-218ENST00000493456 TMPRSS15P98073 1019 aa16.97■□□□□ 0.31
NUP50-218ENST00000493456 YOD1Q5VVQ6 348 aaPredicted RBP16.97■□□□□ 0.31
NUP50-218ENST00000493456 ZNF324BQ6AW86 544 aaPredicted RBP16.97■□□□□ 0.31
NUP50-218ENST00000493456 TTLL10Q6ZVT0 673 aa16.97■□□□□ 0.31
NUP50-218ENST00000493456 SERPINA9Q86WD7 417 aa16.97■□□□□ 0.31
NUP50-218ENST00000493456 PARP9Q8IXQ6 854 aa16.97■□□□□ 0.31
NUP50-218ENST00000493456 OR5K2Q8NHB8 316 aa16.97■□□□□ 0.31
NUP50-218ENST00000493456 ITLN2Q8WWU7 325 aaPredicted RBP16.97■□□□□ 0.31
NUP50-218ENST00000493456 HAUS1Q96CS2 278 aa16.97■□□□□ 0.31
NUP50-218ENST00000493456 THOC3Q96J01 351 aaKnown RBP16.97■□□□□ 0.31
NUP50-218ENST00000493456 CHST11Q9NPF2 352 aa16.97■□□□□ 0.31
NUP50-218ENST00000493456 SUCOQ9UBS9 1254 aaKnown RBP16.97■□□□□ 0.31
NUP50-218ENST00000493456 FEZ2Q9UHY8 353 aaPredicted RBP16.97■□□□□ 0.31
NUP50-218ENST00000493456 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.97■□□□□ 0.31
NUP50-218ENST00000493456 DOCK10Q96BY6 2186 aa16.96■□□□□ 0.31
NUP50-218ENST00000493456 SETD2Q9BYW2 2564 aaPredicted RBP16.96■□□□□ 0.31
NUP50-218ENST00000493456 SVILO95425 2214 aa16.96■□□□□ 0.31
NUP50-218ENST00000493456 ISM1B1AKI9 464 aa16.96■□□□□ 0.31
NUP50-218ENST00000493456 H7C0S8 307 aa16.96■□□□□ 0.31
NUP50-218ENST00000493456 QSOX1O00391 747 aa16.96■□□□□ 0.31
NUP50-218ENST00000493456 PCDH17O14917 1159 aa16.96■□□□□ 0.31
NUP50-218ENST00000493456 DSCR3O14972 297 aa16.96■□□□□ 0.31
NUP50-218ENST00000493456 KRT38O76015 456 aa16.96■□□□□ 0.31
NUP50-218ENST00000493456 AP2A1O95782 977 aa16.96■□□□□ 0.31
NUP50-218ENST00000493456 COMTP21964 271 aa16.96■□□□□ 0.31
NUP50-218ENST00000493456 ACADLP28330 430 aa16.96■□□□□ 0.31
NUP50-218ENST00000493456 MSLNQ13421 630 aaPredicted RBP16.96■□□□□ 0.31
NUP50-218ENST00000493456 RBBP7Q16576 425 aa16.96■□□□□ 0.31
NUP50-218ENST00000493456 CLDN19Q8N6F1 224 aa16.96■□□□□ 0.31
NUP50-218ENST00000493456 LURAP1Q96LR2 239 aa16.96■□□□□ 0.31
NUP50-218ENST00000493456 APOL2Q9BQE5 337 aa16.96■□□□□ 0.31
NUP50-218ENST00000493456 TDRKHQ9Y2W6 561 aaKnown RBP16.96■□□□□ 0.31
NUP50-218ENST00000493456 HYOU1Q9Y4L1 999 aa16.96■□□□□ 0.31
NUP50-218ENST00000493456 CNTRLQ7Z7A1 2325 aa16.95■□□□□ 0.3
NUP50-218ENST00000493456 hCG_1818297A0A087WSY0 165 aa16.95■□□□□ 0.3
NUP50-218ENST00000493456 CCDC78A2IDD5 438 aa16.95■□□□□ 0.3
NUP50-218ENST00000493456 CDKN1CP49918 316 aaPredicted RBP16.95■□□□□ 0.3
NUP50-218ENST00000493456 TDGF1P3P51864 188 aa16.95■□□□□ 0.3
NUP50-218ENST00000493456 PLOD1Q02809 727 aaPredicted RBP16.95■□□□□ 0.3
NUP50-218ENST00000493456 OLIG2Q13516 323 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms