RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 PCM1Q15154 2024 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 NUP210LQ5VU65 1888 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 BHMG1C9JSJ3 638 aaPredicted RBP13.17□□□□□ -0.3
SAMM50-204ENST00000493161 ZRANB2O95218 330 aaKnown RBP eCLIP13.17□□□□□ -0.3
SAMM50-204ENST00000493161 TPH1P17752 444 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 ALAS2P22557 587 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 ELAVL4P26378 380 aaKnown RBP13.17□□□□□ -0.3
SAMM50-204ENST00000493161 SHMT2P34897 504 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 Q0VFX4 171 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 DBN1Q16643 649 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 GPR33Q49SQ1 333 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 PRAMEF13Q5VWM6 474 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 ITPRIPL1Q6GPH6 555 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 TLDC1Q6P9B6 456 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 KIRREL2Q6UWL6 708 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 IGFL2Q6UWQ7 119 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 COX15Q7KZN9 410 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 PARP9Q8IXQ6 854 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 SLC34A3Q8N130 599 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 DTWD1Q8N5C7 304 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 CCDC110Q8TBZ0 833 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 PPP4R1Q8TF05 950 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 HEXDCQ8WVB3 486 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 CNDP1Q96KN2 507 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 TBL1YQ9BQ87 522 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 NDC1Q9BTX1 674 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 CHRNA10Q9GZZ6 450 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 EURLQ9NYK6 297 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 CIDEBQ9UHD4 219 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 CDC23Q9UJX2 597 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 PLCL2Q9UPR0 1127 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 ENTPD4Q9Y227 616 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 HS3ST3B1Q9Y662 390 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 FBN2P35556 2912 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 APCP25054 2843 aa13.17□□□□□ -0.3
SAMM50-204ENST00000493161 ISM1B1AKI9 464 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 GOLGA6L19H0YKK7 550 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 APOC4-APOC2K7ER74 178 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 HNRNPRO43390 633 aaKnown RBP13.16□□□□□ -0.3
SAMM50-204ENST00000493161 KLHL41O60662 606 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 APOC2P02655 101 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 CD63P08962 238 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 MAGP20916 626 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 MMP11P24347 488 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 MCM3P25205 808 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 ANP32AP39687 249 aaKnown RBP13.16□□□□□ -0.3
SAMM50-204ENST00000493161 TSFMP43897 325 aaKnown RBP13.16□□□□□ -0.3
SAMM50-204ENST00000493161 OTUD4Q01804 1114 aaKnown RBP13.16□□□□□ -0.3
SAMM50-204ENST00000493161 CDC16Q13042 620 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 ZNF169Q14929 603 aaPredicted RBP13.16□□□□□ -0.3
SAMM50-204ENST00000493161 ZNF449Q6P9G9 518 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 TTLL10Q6ZVT0 673 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 FJX1Q86VR8 437 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 C2orf73Q8N5S3 287 aaPredicted RBP13.16□□□□□ -0.3
SAMM50-204ENST00000493161 CATSPER1Q8NEC5 780 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 ACTL9Q8TC94 416 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 FAR1Q8WVX9 515 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 PHF12Q96QT6 1004 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 SPSB2Q99619 263 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 SOX17Q9H6I2 414 aaPredicted RBP13.16□□□□□ -0.3
SAMM50-204ENST00000493161 VPS37BQ9H9H4 285 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 ZNHIT6Q9NWK9 470 aaKnown RBP13.16□□□□□ -0.3
SAMM50-204ENST00000493161 PIH1D1Q9NWS0 290 aaKnown RBP13.16□□□□□ -0.3
SAMM50-204ENST00000493161 SMARCAL1Q9NZC9 954 aa13.16□□□□□ -0.3
SAMM50-204ENST00000493161 AAR2Q9Y312 384 aaKnown RBP13.16□□□□□ -0.3
SAMM50-204ENST00000493161 SNRNP200O75643 2136 aaKnown RBP13.15□□□□□ -0.3
SAMM50-204ENST00000493161 OR51F1A6NGY5 319 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 KCNN4O15554 427 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 KLHL18O94889 574 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 EDN3P14138 238 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 GRNP28799 593 aaKnown RBP13.15□□□□□ -0.3
SAMM50-204ENST00000493161 GRIA3P42263 894 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 NKG7Q16617 165 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 SLC5A12Q1EHB4 618 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 AGAP7PQ5VUJ5 663 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 OVCH1Q7RTY7 1134 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 MCATQ8IVS2 390 aaKnown RBP13.15□□□□□ -0.3
SAMM50-204ENST00000493161 TBC1D21Q8IYX1 336 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 METTL27Q8N6F8 245 aaPredicted RBP13.15□□□□□ -0.3
SAMM50-204ENST00000493161 LINC01555Q8NAE3 123 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 OR5K2Q8NHB8 316 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 ELMO1Q92556 727 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 CDKN2AIPNLQ96HQ2 116 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 AGAP4Q96P64 663 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 ARNT2Q9HBZ2 717 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 NLE1Q9NVX2 485 aaPredicted RBP13.15□□□□□ -0.3
SAMM50-204ENST00000493161 OR6C2Q9NZP2 312 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 CTSFQ9UBX1 484 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 DOCK10Q96BY6 2186 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 PDZD2O15018 2839 aa13.15□□□□□ -0.3
SAMM50-204ENST00000493161 ANKRD17O75179 2603 aaKnown RBP13.14□□□□□ -0.31
SAMM50-204ENST00000493161 ANKRD12Q6UB98 2062 aa13.14□□□□□ -0.31
SAMM50-204ENST00000493161 A0A1B0GX78 115 aa13.14□□□□□ -0.31
SAMM50-204ENST00000493161 SLC5A10A0PJK1 596 aa13.14□□□□□ -0.31
SAMM50-204ENST00000493161 MACROD2A1Z1Q3 448 aa13.14□□□□□ -0.31
SAMM50-204ENST00000493161 PRSS44E7EML9 344 aa13.14□□□□□ -0.31
SAMM50-204ENST00000493161 H7C0S8 307 aa13.14□□□□□ -0.31
SAMM50-204ENST00000493161 LIN7AO14910 233 aaPredicted RBP13.14□□□□□ -0.31
SAMM50-204ENST00000493161 MFAP3LO75121 409 aa13.14□□□□□ -0.31
SAMM50-204ENST00000493161 AP2A2O94973 939 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms