RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 SAR1AQ9NR31 198 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 DNAJC16Q9Y2G8 782 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 SH3GLB1Q9Y371 365 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 DUSP10Q9Y6W6 482 aa12.81□□□□□ -0.36
HDAC3-213ENST00000492506 ADGRG4Q8IZF6 3080 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 A0A0A6YYK5 440 aaPredicted RBP12.8□□□□□ -0.36
HDAC3-213ENST00000492506 PDZK1P1A8MUH7 402 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 KMOO15229 486 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 MATN3O15232 486 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 MAP3K7O43318 606 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 MFSD11O43934 449 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 DPM1O60762 260 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 FTLP02792 175 aaPredicted RBP12.8□□□□□ -0.36
HDAC3-213ENST00000492506 HLA-DQB2P05538 268 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 PTDSS1P48651 473 aaKnown RBP12.8□□□□□ -0.36
HDAC3-213ENST00000492506 INSCQ1MX18 579 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 KHDC1Q4VXA5 237 aaKnown RBP12.8□□□□□ -0.36
HDAC3-213ENST00000492506 LCN10Q6JVE6 187 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 ZNF554Q86TJ5 538 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 LRRTM4Q86VH4 590 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 ZNF398Q8TD17 642 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 CKAP2Q8WWK9 683 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 FATE1Q969F0 183 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 GLYATL1Q969I3 302 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 SNRNP40Q96DI7 357 aaKnown RBP12.8□□□□□ -0.36
HDAC3-213ENST00000492506 ZNF514Q96K75 400 aaPredicted RBP12.8□□□□□ -0.36
HDAC3-213ENST00000492506 MLPHQ9BV36 600 aaPredicted RBP12.8□□□□□ -0.36
HDAC3-213ENST00000492506 ETNK1Q9HBU6 452 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 TIMMDC1Q9NPL8 285 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 FGF21Q9NSA1 209 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 RBM22Q9NW64 420 aaKnown RBP eCLIP12.8□□□□□ -0.36
HDAC3-213ENST00000492506 PTTG2Q9NZH5 202 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 NFKBIL1Q9UBC1 381 aaPredicted RBP12.8□□□□□ -0.36
HDAC3-213ENST00000492506 AMACRQ9UHK6 382 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 TMPRSS11EQ9UL52 423 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 INTUQ9ULD6 942 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 ACTL7BQ9Y614 415 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 BZW2Q9Y6E2 419 aaKnown RBP12.8□□□□□ -0.36
HDAC3-213ENST00000492506 USH1CQ9Y6N9 552 aa12.8□□□□□ -0.36
HDAC3-213ENST00000492506 MTX2O75431 263 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 TMEM63AO94886 807 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 ZWINTO95229 277 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 JCHAINP01591 159 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 CD48P09326 243 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 GZMAP12544 262 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 VARSP26640 1264 aaKnown RBP12.79□□□□□ -0.36
HDAC3-213ENST00000492506 CXCR5P32302 372 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 SERPINB4P48594 390 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 ITGA1P56199 1179 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 DCDC1P59894 354 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 SLC25A11Q02978 314 aaKnown RBP12.79□□□□□ -0.36
HDAC3-213ENST00000492506 ACY1Q03154 408 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 AP1B1Q10567 949 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 MMRN1Q13201 1228 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 RCN2Q14257 317 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 NR6A1Q15406 480 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 PLEKHN1Q494U1 663 aaPredicted RBP12.79□□□□□ -0.36
HDAC3-213ENST00000492506 FAM69BQ5VUD6 431 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 RINLQ6ZS11 566 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 ARHGEF18Q6ZSZ5 1173 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 ZNF571Q7Z3V5 609 aaPredicted RBP12.79□□□□□ -0.36
HDAC3-213ENST00000492506 HPS6Q86YV9 775 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 RHOT1Q8IXI2 618 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 D2HGDHQ8N465 521 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 TRAM1L1Q8N609 369 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 GLIS1Q8NBF1 620 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 GPR150Q8NGU9 434 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 LRRN4Q8WUT4 740 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 CTNNBL1Q8WYA6 563 aaPredicted RBP12.79□□□□□ -0.36
HDAC3-213ENST00000492506 TSGA13Q96PP4 275 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 RANBP9Q96S59 729 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 SMAD5Q99717 465 aaKnown RBP12.79□□□□□ -0.36
HDAC3-213ENST00000492506 MAP3K3Q99759 626 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 ZSCAN5AQ9BUG6 496 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 NUP85Q9BW27 656 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 CHST8Q9H2A9 424 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 ASF1BQ9NVP2 202 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 SLC5A6Q9Y289 635 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 ZGRF1Q86YA3 2104 aa12.79□□□□□ -0.36
HDAC3-213ENST00000492506 ANKRD12Q6UB98 2062 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 DDX3XO00571 662 aaKnown RBP eCLIP12.78□□□□□ -0.364e-13■■■■□ 23.7
HDAC3-213ENST00000492506 CPNE3O75131 537 aaKnown RBP12.78□□□□□ -0.36
HDAC3-213ENST00000492506 SCRG1O75711 98 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 CAPN1P07384 714 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 PABPC4LP0CB38 370 aaKnown RBP12.78□□□□□ -0.36
HDAC3-213ENST00000492506 PIM1P11309 404 aaPredicted RBP12.78□□□□□ -0.36
HDAC3-213ENST00000492506 IDSP22304 550 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 CA4P22748 312 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 CCNCP24863 283 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 ELAVL4P26378 380 aaKnown RBP12.78□□□□□ -0.36
HDAC3-213ENST00000492506 ARSEP51690 589 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 XIAPP98170 497 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 PAFAH1B3Q15102 231 aaKnown RBP12.78□□□□□ -0.36
HDAC3-213ENST00000492506 SLC18A3Q16572 532 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 CNPY1Q3B7I2 92 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 LIN52Q52LA3 116 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 HSP90AA5PQ58FG0 334 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 NCBP2-AS2Q69YL0 99 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 PDPK2PQ6A1A2 396 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 TRMT10CQ7L0Y3 403 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms