RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 MIF4GDA9UHW6 222 aaKnown RBP8.58□□□□□ -1.04
HDAC3-211ENST00000491581 E7EQ34 232 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 NIPSNAP2O75323 286 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 SEMA7AO75326 666 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 OR2B3O76000 313 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 SUN1O94901 812 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 STATHP02808 62 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 MT-ND3P03897 115 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 UMODP07911 640 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 PKLRP30613 574 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 CETN2P41208 172 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 NSG1P42857 185 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 PDE1BQ01064 536 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 ACVR1Q04771 509 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 CDH17Q12864 832 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 UBAP2LQ14157 1087 aaKnown RBP8.58□□□□□ -1.04
HDAC3-211ENST00000491581 FASTKQ14296 549 aaKnown RBP8.58□□□□□ -1.04
HDAC3-211ENST00000491581 NCF4Q15080 339 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 KYNUQ16719 465 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 P3H1Q32P28 736 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 CTSL3PQ5NE16 218 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 MEI1Q5TIA1 1274 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 ANKRD22Q5VYY1 191 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 FCRL6Q6DN72 434 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 TTC27Q6P3X3 843 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 CNSTQ6PJW8 725 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 CLEC18BQ6UXF7 455 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 PACS1Q6VY07 963 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 APLFQ8IW19 511 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-211ENST00000491581 DNAJC22Q8N4W6 341 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 RBMXL3Q8N7X1 1067 aaKnown RBP8.58□□□□□ -1.04
HDAC3-211ENST00000491581 TTC13Q8NBP0 860 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 CLEC18CQ8NCF0 446 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 OR4L1Q8NH43 312 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 ZFPM2Q8WW38 1151 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 INPP5DQ92835 1189 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 MFSD3Q96ES6 412 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 MS4A14Q96JA4 679 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 SLC30A3Q99726 388 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 FERMT1Q9BQL6 677 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 AP1M1Q9BXS5 423 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 NLNQ9BYT8 704 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 SLC7A5P2Q9GIP4 190 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 MVB12BQ9H7P6 319 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 LATS2Q9NRM7 1088 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 ANKMY1Q9P2S6 941 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 PTRH2Q9Y3E5 179 aaKnown RBP8.58□□□□□ -1.04
HDAC3-211ENST00000491581 HEBP2Q9Y5Z4 205 aa8.58□□□□□ -1.04
HDAC3-211ENST00000491581 A0A0J9YY10 115 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 E7EVH7 732 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 LIN7AO14910 233 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-211ENST00000491581 AP2A2O94973 939 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 FTH1P02794 183 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 KLK3P07288 261 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-211ENST00000491581 ADRA1DP25100 572 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 COL8A1P27658 744 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 SHMT2P34897 504 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 OR1D4P47884 311 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 CD151P48509 253 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 PGDP52209 483 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 PGGT1BP53609 377 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 BASP1P80723 227 aaKnown RBP8.57□□□□□ -1.04
HDAC3-211ENST00000491581 ITIH4Q14624 930 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 EIF2S3LQ2VIR3 472 aaKnown RBP8.57□□□□□ -1.04
HDAC3-211ENST00000491581 FASTKD1Q53R41 847 aaKnown RBP8.57□□□□□ -1.04
HDAC3-211ENST00000491581 SEL1L2Q5TEA6 688 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 FRMPD2BQ6IN97 320 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 AFTPHQ6ULP2 937 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 COX15Q7KZN9 410 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 PPP1R32Q7Z5V6 425 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 SLC22A15Q8IZD6 547 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 SYCE1Q8N0S2 351 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 AGGF1Q8N302 714 aaeCLIP8.57□□□□□ -1.04
HDAC3-211ENST00000491581 PPFIBP2Q8ND30 876 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 OR5K2Q8NHB8 316 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 DENND1AQ8TEH3 1009 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 GBP5Q96PP8 586 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 ALS2CR12Q96Q35 445 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 GPR87Q9BY21 358 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 P2RY12Q9H244 342 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 MLXIPLQ9NP71 852 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 TREX1Q9NSU2 369 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 CATSPERZQ9NTU4 200 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 IRAK4Q9NWZ3 460 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 MAP10Q9P2G4 905 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 FEZ2Q9UHY8 353 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-211ENST00000491581 NTNG1Q9Y2I2 539 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 MAU2Q9Y6X3 613 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 DOPEY2Q9Y3R5 2298 aa8.57□□□□□ -1.04
HDAC3-211ENST00000491581 PCM1Q15154 2024 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 LOC105369274A0A096LPK9 316 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 LOC102723532A0A0G2JNH3 316 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 A1L4Q6 167 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 HEATR9A2RTY3 570 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 GOLGA8MH3BSY2 632 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 CD3EAPO15446 510 aaKnown RBP8.56□□□□□ -1.04
HDAC3-211ENST00000491581 ZSCAN9O15535 394 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-211ENST00000491581 PRICKLE3O43900 615 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-211ENST00000491581 CTSVO60911 334 aa8.56□□□□□ -1.04
HDAC3-211ENST00000491581 GPC4O75487 556 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms