RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 BRSK1Q8TDC3 778 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 PIH1D2Q8WWB5 315 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 SELENOMQ8WWX9 145 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 KIFC1Q9BW19 673 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 GPR63Q9BZJ6 419 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 MAFBQ9Y5Q3 323 aaPredicted RBP11.28□□□□□ -0.6
PCSK9-202ENST00000490692 NUP205Q92621 2012 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 SLX4Q8IY92 1834 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 ALX3O95076 343 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 ALDH2P05091 517 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 PRKAR1AP10644 381 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 HTR1EP28566 365 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 AXLP30530 894 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 CD68P34810 354 aaPredicted RBP11.28□□□□□ -0.6
PCSK9-202ENST00000490692 RGS4P49798 205 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 UGT8Q16880 541 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 C6orf136Q5SQH8 315 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 KIAA0930Q6ICG6 404 aaPredicted RBP11.28□□□□□ -0.6
PCSK9-202ENST00000490692 OR2T5Q6IEZ7 315 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 GDPD3Q7L5L3 318 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 SLC38A6Q8IZM9 456 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 OR2T29Q8NH02 315 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 ZNF675Q8TD23 568 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 TEX37Q96LM6 180 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 SPASTQ9UBP0 616 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 TRAV19A0A0A6YYK7 116 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 PRAMEF33A0A0G2JMD5 474 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 SLC12A8A0AV02 714 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 PRAMEF10O60809 474 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 ECI2O75521 394 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 NDST3O95803 873 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 OPN1SWP03999 348 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 HLA-DQB2P05538 268 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 CRATP43155 626 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 PPP3CCP48454 512 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 CDC42P60953 191 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 RPP38P78345 283 aaKnown RBP11.28□□□□□ -0.6
PCSK9-202ENST00000490692 RPL6Q02878 288 aaKnown RBP11.28□□□□□ -0.6
PCSK9-202ENST00000490692 XAF1Q6GPH4 301 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 PNCKQ6P2M8 343 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 Q6ZPB1 254 aaPredicted RBP11.28□□□□□ -0.6
PCSK9-202ENST00000490692 ASB18Q6ZVZ8 466 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 HDDC2Q7Z4H3 204 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 RBM23Q86U06 439 aaKnown RBP11.28□□□□□ -0.6
PCSK9-202ENST00000490692 GHDCQ8N2G8 530 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 OR4L1Q8NH43 312 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 VANGL1Q8TAA9 524 aaPredicted RBP11.28□□□□□ -0.6
PCSK9-202ENST00000490692 AKAP1Q92667 903 aaKnown RBP eCLIP11.28□□□□□ -0.63e-11■■■■■ 41.6
PCSK9-202ENST00000490692 RNFT2Q96EX2 444 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 MED30Q96HR3 178 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 FCRL2Q96LA5 508 aaPredicted RBP11.28□□□□□ -0.6
PCSK9-202ENST00000490692 GPR78Q96P69 363 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 NEDD4LQ96PU5 975 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 NXF3Q9H4D5 531 aaKnown RBP11.28□□□□□ -0.6
PCSK9-202ENST00000490692 IPPKQ9H8X2 491 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 GPR83Q9NYM4 423 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 OPTCQ9UBM4 332 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 UTS2RQ9UKP6 389 aa11.28□□□□□ -0.6
PCSK9-202ENST00000490692 PRRC2BQ5JSZ5 2229 aaKnown RBP11.28□□□□□ -0.6
PCSK9-202ENST00000490692 LY75O60449 1722 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 C2orf81A6NN90 581 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 SMLR1H3BR10 107 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 UBFD1O14562 309 aaKnown RBP11.27□□□□□ -0.6
PCSK9-202ENST00000490692 PGRP06401 933 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 CKMT1AP12532 417 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 GLULP15104 373 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 PFKLP17858 780 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 CDH12P55289 794 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 PPP2R2BQ00005 443 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 MVKQ03426 396 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 FOXM1Q08050 763 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 CDK10Q15131 360 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 ZMYND11Q15326 602 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 SIGIRRQ6IA17 410 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 RASSF6Q6ZTQ3 369 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 BEND5Q7L4P6 421 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 GLT6D1Q7Z4J2 308 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 DPP9Q86TI2 863 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 UNC93AQ86WB7 457 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 PPP3R2Q96LZ3 170 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 AMBRA1Q9C0C7 1298 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 ELP3Q9H9T3 547 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 MARCH4Q9P2E8 410 aaPredicted RBP11.27□□□□□ -0.6
PCSK9-202ENST00000490692 SAMD4AQ9UPU9 718 aaKnown RBP11.27□□□□□ -0.6
PCSK9-202ENST00000490692 ARL5AQ9Y689 179 aa11.27□□□□□ -0.6
PCSK9-202ENST00000490692 CASKO14936 926 aa11.27□□□□□ -0.61
PCSK9-202ENST00000490692 SSNA1O43805 119 aa11.27□□□□□ -0.61
PCSK9-202ENST00000490692 SSX4O60224 188 aa11.27□□□□□ -0.61
PCSK9-202ENST00000490692 KCNK2O95069 426 aa11.27□□□□□ -0.61
PCSK9-202ENST00000490692 GABARAPO95166 117 aa11.27□□□□□ -0.61
PCSK9-202ENST00000490692 MYL3P08590 195 aa11.27□□□□□ -0.61
PCSK9-202ENST00000490692 GSTM1P09488 218 aa11.27□□□□□ -0.61
PCSK9-202ENST00000490692 GABARAPL2P60520 117 aa11.27□□□□□ -0.61
PCSK9-202ENST00000490692 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.27□□□□□ -0.61
PCSK9-202ENST00000490692 ST3GAL4Q11206 333 aa11.27□□□□□ -0.61
PCSK9-202ENST00000490692 DCAF4L1Q3SXM0 396 aa11.27□□□□□ -0.61
PCSK9-202ENST00000490692 SYVN1Q86TM6 617 aa11.27□□□□□ -0.61
PCSK9-202ENST00000490692 PELI3Q8N2H9 469 aa11.27□□□□□ -0.61
PCSK9-202ENST00000490692 FAM109AQ8N4B1 249 aa11.27□□□□□ -0.61
PCSK9-202ENST00000490692 OR6C4Q8NGE1 309 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms