RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 RGRP47804 291 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 ADPRHP54922 357 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 MAXP61244 160 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 SRSF1Q07955 248 aaKnown RBP eCLIP8□□□□□ -1.13
TRAPPC12-221ENST00000489032 ELP6Q0PNE2 266 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 SLC14A1Q13336 389 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 PRPSAP1Q14558 356 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 PRKD1Q15139 912 aaPredicted RBP8□□□□□ -1.13
TRAPPC12-221ENST00000489032 DUOXA1Q1HG43 343 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 FLYWCH1Q4VC44 716 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 ARMC12Q5T9G4 340 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 DCAF12L1Q5VU92 463 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 ITPRIPL1Q6GPH6 555 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 CCDC70Q6NSX1 233 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 NEK5Q6P3R8 708 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 PARS2Q7L3T8 475 aaKnown RBP8□□□□□ -1.13
TRAPPC12-221ENST00000489032 PID1Q7Z2X4 250 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 RABEPKQ7Z6M1 372 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 PRPF39Q86UA1 669 aaKnown RBP8□□□□□ -1.13
TRAPPC12-221ENST00000489032 CTAGE6Q86UF2 777 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 CAMK1DQ8IU85 385 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 CTAGE4Q8IX94 777 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8□□□□□ -1.13
TRAPPC12-221ENST00000489032 DEFB119Q8N690 84 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 FRMD1Q8N878 549 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 PDCD6IPQ8WUM4 868 aaKnown RBP8□□□□□ -1.13
TRAPPC12-221ENST00000489032 ARRDC3Q96B67 414 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 SLC35A4Q96G79 324 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 ZNF419Q96HQ0 510 aaPredicted RBP8□□□□□ -1.13
TRAPPC12-221ENST00000489032 FEM1CQ96JP0 617 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 CAMK1GQ96NX5 476 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 AGAP3Q96P47 875 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 PPP1R2P1Q96PQ5 205 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 DMRTA2Q96SC8 542 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 ADOQ96SZ5 270 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 IL12RB2Q99665 862 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 MYOCQ99972 504 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 REXO4Q9GZR2 422 aaKnown RBP8□□□□□ -1.13
TRAPPC12-221ENST00000489032 PRORYQ9H606 182 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 NOD2Q9HC29 1040 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 SARS2Q9NP81 518 aaKnown RBP8□□□□□ -1.13
TRAPPC12-221ENST00000489032 CD93Q9NPY3 652 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 ARGLU1Q9NWB6 273 aaPredicted RBP8□□□□□ -1.13
TRAPPC12-221ENST00000489032 RNF14Q9UBS8 474 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 SERGEFQ9UGK8 458 aa8□□□□□ -1.13
TRAPPC12-221ENST00000489032 CNOT11Q9UKZ1 510 aaKnown RBP8□□□□□ -1.13
TRAPPC12-221ENST00000489032 SPTA1P02549 2419 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 GOLGA6L10A0A0M3HER8 536 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 TCRBV7S2A1N4TA0A589 114 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 TRABD2BA6NFA1 517 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 RNF103O00237 685 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 PLK4O00444 970 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 CES2O00748 559 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 MUSKO15146 869 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 KCNN4O15554 427 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 PLRG1O43660 514 aaKnown RBP7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 SH3BP5O60239 455 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 TUSC2O75896 110 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 FGGP02679 453 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 PTPN3P26045 913 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 RBL1P28749 1068 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 CXCR5P32302 372 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 PTGER3P43115 390 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 CCR5P51681 352 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 RPS21P63220 83 aaKnown RBP7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 ZBTB17Q13105 803 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 FGL2Q14314 439 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 ICAM4Q14773 271 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 UGP2Q16851 508 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 SETMARQ53H47 684 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 PIP5KL1Q5T9C9 394 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 KIAA0895LQ68EN5 471 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 KIAA1161Q6NSJ0 714 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 ZNF585AQ6P3V2 769 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 PGBD5Q8N414 524 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 ZNF808Q8N4W9 903 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 BRIX1Q8TDN6 353 aaKnown RBP7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 CXorf40AQ8TE69 158 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 ANKRD7Q92527 254 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 SKA1Q96BD8 255 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 C20orf173Q96LM9 149 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 OSBPL9Q96SU4 736 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 HERPUD2Q9BSE4 406 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 C1QTNF7Q9BXJ2 289 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 ADGRE3Q9BY15 652 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 GPR87Q9BY21 358 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 SLC25A51Q9H1U9 297 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 PIEZO2Q9H5I5 2752 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 GLOD4Q9HC38 313 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 FSCN3Q9NQT6 498 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 RSPH14Q9UHP6 348 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 ST6GALNAC2Q9UJ37 374 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 PILRBQ9UKJ0 227 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 PHTF1Q9UMS5 762 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 ZNF148Q9UQR1 794 aa7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 ATXN2Q99700 1313 aaKnown RBP7.99□□□□□ -1.13
TRAPPC12-221ENST00000489032 PLXND1Q9Y4D7 1925 aa7.98□□□□□ -1.13
TRAPPC12-221ENST00000489032 TSPAN11A1L157 253 aa7.98□□□□□ -1.13
TRAPPC12-221ENST00000489032 PGRMC1O00264 195 aaKnown RBP7.98□□□□□ -1.13
TRAPPC12-221ENST00000489032 ATP1A1P05023 1023 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms