RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SBK3P0C264 359 aa18.9■□□□□ 0.62
CCM2-216ENST00000488727 PKMP14618 531 aaKnown RBP18.9■□□□□ 0.62
CCM2-216ENST00000488727 STMN1P16949 149 aa18.9■□□□□ 0.62
CCM2-216ENST00000488727 RAP1GDS1P52306 607 aa18.9■□□□□ 0.62
CCM2-216ENST00000488727 POU4F1Q01851 419 aa18.9■□□□□ 0.62
CCM2-216ENST00000488727 ILF2Q12905 390 aaKnown RBP18.9■□□□□ 0.62
CCM2-216ENST00000488727 SUZ12Q15022 739 aaKnown RBP18.9■□□□□ 0.62
CCM2-216ENST00000488727 DNAL1Q4LDG9 190 aa18.9■□□□□ 0.62
CCM2-216ENST00000488727 LRRC8EQ6NSJ5 796 aa18.9■□□□□ 0.62
CCM2-216ENST00000488727 EID2Q8N6I1 236 aa18.9■□□□□ 0.62
CCM2-216ENST00000488727 FAM46DQ8NEK8 389 aa18.9■□□□□ 0.62
CCM2-216ENST00000488727 GATA5Q9BWX5 397 aaPredicted RBP18.9■□□□□ 0.62
CCM2-216ENST00000488727 MED16Q9Y2X0 877 aa18.9■□□□□ 0.62
CCM2-216ENST00000488727 C17orf113A0A1B0GUU1 675 aa18.89■□□□□ 0.61
CCM2-216ENST00000488727 A6NCN8 305 aa18.89■□□□□ 0.61
CCM2-216ENST00000488727 B2RBV5 119 aa18.89■□□□□ 0.61
CCM2-216ENST00000488727 FLRT2O43155 660 aa18.89■□□□□ 0.61
CCM2-216ENST00000488727 TRIM16O95361 564 aa18.89■□□□□ 0.61
CCM2-216ENST00000488727 VCLP18206 1134 aa18.89■□□□□ 0.61
CCM2-216ENST00000488727 KPNA2P52292 529 aaKnown RBP18.89■□□□□ 0.61
CCM2-216ENST00000488727 GTF2A1P52655 376 aaPredicted RBP18.89■□□□□ 0.61
CCM2-216ENST00000488727 C6orf132Q5T0Z8 1188 aa18.89■□□□□ 0.61
CCM2-216ENST00000488727 RBM20Q5T481 1227 aaKnown RBP18.89■□□□□ 0.61
CCM2-216ENST00000488727 HM13Q8TCT9 377 aa18.89■□□□□ 0.61
CCM2-216ENST00000488727 KCTD4Q8WVF5 259 aa18.89■□□□□ 0.61
CCM2-216ENST00000488727 FAM136AQ96C01 138 aa18.89■□□□□ 0.61
CCM2-216ENST00000488727 GPR78Q96P69 363 aa18.89■□□□□ 0.61
CCM2-216ENST00000488727 NDNQ99608 321 aa18.89■□□□□ 0.61
CCM2-216ENST00000488727 DRC3Q9H069 523 aa18.89■□□□□ 0.61
CCM2-216ENST00000488727 PRDM8Q9NQV8 689 aa18.89■□□□□ 0.61
CCM2-216ENST00000488727 GALPQ9UBC7 116 aa18.89■□□□□ 0.61
CCM2-216ENST00000488727 C15orf41Q9Y2V0 281 aa18.89■□□□□ 0.61
CCM2-216ENST00000488727 COL5A1P20908 1838 aaPredicted RBP18.89■□□□□ 0.61
CCM2-216ENST00000488727 SIGLEC6O43699 453 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 SH3BP5O60239 455 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 KCNJ13O60928 360 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 ANP32DO95626 131 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 RPL10P27635 214 aaKnown RBP18.88■□□□□ 0.61
CCM2-216ENST00000488727 CCR7P32248 378 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 GRK6P43250 576 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 METRNLQ641Q3 311 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 EPGNQ6UW88 154 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 SPNS2Q8IVW8 549 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 NAXDQ8IW45 347 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 CFAP206Q8IYR0 622 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 NETO1Q8TDF5 533 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 PATE1Q8WXA2 126 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 ELMO1Q92556 727 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 ANKRD27Q96NW4 1050 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 CAMK1GQ96NX5 476 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 DPEP2Q9H4A9 486 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 COG4Q9H9E3 785 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 RUVBL2Q9Y230 463 aaKnown RBP18.88■□□□□ 0.61
CCM2-216ENST00000488727 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.88■□□□□ 0.61
CCM2-216ENST00000488727 GOLGA4Q13439 2230 aaKnown RBP18.88■□□□□ 0.61
CCM2-216ENST00000488727 PIEZO1Q92508 2521 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 KLHL33A6NCF5 533 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 B4DGG1 531 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 TK2O00142 265 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 SNX2O60749 519 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 ASPHQ12797 758 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 BOP1Q14137 746 aaKnown RBP18.88■□□□□ 0.61
CCM2-216ENST00000488727 UBAP2LQ14157 1087 aaKnown RBP18.88■□□□□ 0.61
CCM2-216ENST00000488727 CEP97Q8IW35 865 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 NAGSQ8N159 534 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 ZNF781Q8N8C0 355 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 RBM15BQ8NDT2 890 aaKnown RBP18.88■□□□□ 0.61
CCM2-216ENST00000488727 SETD7Q8WTS6 366 aaKnown RBP18.88■□□□□ 0.61
CCM2-216ENST00000488727 ELMO2Q96JJ3 720 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 PANX3Q96QZ0 392 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 AARSD1Q9BTE6 412 aaKnown RBP18.88■□□□□ 0.61
CCM2-216ENST00000488727 DUSP23Q9BVJ7 150 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 SCHIP1Q9P0W5 487 aaPredicted RBP18.88■□□□□ 0.61
CCM2-216ENST00000488727 PCOLCE2Q9UKZ9 415 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 WDR37Q9Y2I8 494 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 RAP2CQ9Y3L5 183 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 CEP250Q9BV73 2442 aa18.88■□□□□ 0.61
CCM2-216ENST00000488727 H3BMM5 538 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 NOBOXO60393 691 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 SNUPNO95149 360 aaKnown RBP18.87■□□□□ 0.61
CCM2-216ENST00000488727 GSTM1P09488 218 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 TPBGLP0DKB5 382 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 GNAZP19086 355 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 IDSP22304 550 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 AOAHP28039 575 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 PGM1P36871 562 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 PREPP48147 710 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 TIAL1Q01085 375 aaKnown RBP eCLIP18.87■□□□□ 0.61
CCM2-216ENST00000488727 GSTM4Q03013 218 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 RCN2Q14257 317 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 METTL21CQ5VZV1 264 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 ZCCHC8Q6NZY4 707 aaKnown RBP18.87■□□□□ 0.61
CCM2-216ENST00000488727 RHBDD1Q8TEB9 315 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 ZDHHC1Q8WTX9 485 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 SCYL1Q96KG9 808 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 CCDC68Q9H2F9 335 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 DCLRE1BQ9H816 532 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 CPSF2Q9P2I0 782 aaKnown RBP18.87■□□□□ 0.61
CCM2-216ENST00000488727 NKX1-2Q9UD57 310 aaPredicted RBP18.87■□□□□ 0.61
CCM2-216ENST00000488727 MCM8Q9UJA3 840 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms