RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 CCDC42Q96M95 316 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 INSM2Q96T92 566 aaPredicted RBP11.19□□□□□ -0.62
TRIM56-204ENST00000487252 NUP85Q9BW27 656 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 LACRTQ9GZZ8 138 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 ZNF160Q9HCG1 818 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 SIX2Q9NPC8 291 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 AIPL1Q9NZN9 384 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 TMPRSS11EQ9UL52 423 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 MYO6Q9UM54 1294 aa11.19□□□□□ -0.62
TRIM56-204ENST00000487252 IDSB3KWA1 339 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 PRRG2O14669 202 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 MAP3K7O43318 606 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 MAFKO60675 156 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 IPO7O95373 1038 aaKnown RBP11.18□□□□□ -0.62
TRIM56-204ENST00000487252 BMP10O95393 424 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 SERPING1P05155 500 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 SERPINA7P05543 415 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 PVRP15151 417 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 ERCC2P18074 760 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 HLA-DPA1P20036 260 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 GSCP56915 257 aaPredicted RBP11.18□□□□□ -0.62
TRIM56-204ENST00000487252 RPL26P61254 145 aaKnown RBP11.18□□□□□ -0.62
TRIM56-204ENST00000487252 NKX6-1P78426 367 aaPredicted RBP11.18□□□□□ -0.62
TRIM56-204ENST00000487252 PRKAA1Q13131 559 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 SPA17Q15506 151 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 RBBP7Q16576 425 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 ANKRD20A8PQ5CZ79 823 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 PPP1R15BQ5SWA1 713 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 NAA35Q5VZE5 725 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 METRNLQ641Q3 311 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 ALG1LQ6GMV1 187 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 HIBCHQ6NVY1 386 aaPredicted RBP11.18□□□□□ -0.62
TRIM56-204ENST00000487252 TLDC1Q6P9B6 456 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 COX15Q7KZN9 410 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 KIAA1328Q86T90 577 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 AMZ2Q86W34 360 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 ZZZ3Q8IYH5 903 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 TRAM1L1Q8N609 369 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 SIRT6Q8N6T7 355 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 GPR26Q8NDV2 337 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 OR4E2Q8NGC2 313 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 SUN3Q8TAQ9 357 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 SPATA16Q9BXB7 569 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 TDRD1Q9BXT4 1180 aaKnown RBP11.18□□□□□ -0.62
TRIM56-204ENST00000487252 TSPAN10Q9H1Z9 355 aaPredicted RBP11.18□□□□□ -0.62
TRIM56-204ENST00000487252 NEUROD4Q9HD90 331 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 TXLNGQ9NUQ3 528 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 IMP3Q9NV31 184 aaKnown RBP11.18□□□□□ -0.62
TRIM56-204ENST00000487252 ZNF446Q9NWS9 450 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 TRPS1Q9UHF7 1281 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 NXT1Q9UKK6 140 aaKnown RBP11.18□□□□□ -0.62
TRIM56-204ENST00000487252 GUCA1BQ9UMX6 200 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 RPL26L1Q9UNX3 145 aaKnown RBP11.18□□□□□ -0.62
TRIM56-204ENST00000487252 PCDHA13Q9Y5I0 950 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 HRH3Q9Y5N1 445 aa11.18□□□□□ -0.62
TRIM56-204ENST00000487252 CFAP20Q9Y6A4 193 aaKnown RBP11.18□□□□□ -0.62
TRIM56-204ENST00000487252 PHF3Q92576 2039 aaKnown RBP11.18□□□□□ -0.62
TRIM56-204ENST00000487252 GTPBP10A4D1E9 387 aaKnown RBP11.17□□□□□ -0.62
TRIM56-204ENST00000487252 VSTM2BA6NLU5 285 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 NPIPA5E9PKD4 350 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 EEF2KO00418 725 aaKnown RBP11.17□□□□□ -0.62
TRIM56-204ENST00000487252 ATP8B1O43520 1251 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 KRT3P12035 628 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 GPD1P21695 349 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 PON1P27169 355 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 TMPRSS15P98073 1019 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 ALDH6A1Q02252 535 aaKnown RBP11.17□□□□□ -0.62
TRIM56-204ENST00000487252 ATP13A4Q4VNC1 1196 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 ZNF766Q5HY98 468 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 SCYL2Q6P3W7 929 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 CEP128Q6ZU80 1094 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 RFX8Q6ZV50 586 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 TRAPPC5Q8IUR0 188 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 GHDCQ8N2G8 530 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 TXLNBQ8N3L3 684 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 TEX26Q8N6G2 289 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 ZNF655Q8N720 491 aaPredicted RBP11.17□□□□□ -0.62
TRIM56-204ENST00000487252 GOT1L1Q8NHS2 421 aaPredicted RBP11.17□□□□□ -0.62
TRIM56-204ENST00000487252 SLC20A1Q8WUM9 679 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 FRMD6Q96NE9 622 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 KLHL25Q9H0H3 589 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 ARGLU1Q9NWB6 273 aaPredicted RBP11.17□□□□□ -0.62
TRIM56-204ENST00000487252 NPIPA1Q9UND3 350 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 CHKBQ9Y259 395 aa11.17□□□□□ -0.62
TRIM56-204ENST00000487252 FAM227AF5H4B4 570 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 H7C1Q1 480 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 BTN3A3O00478 584 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 CYP1A1P04798 512 aaPredicted RBP11.16□□□□□ -0.62
TRIM56-204ENST00000487252 PYGMP11217 842 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 COX6A1P12074 109 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 ACPPP15309 386 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 MMP13P45452 471 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 ZNF143P52747 638 aaPredicted RBP11.16□□□□□ -0.62
TRIM56-204ENST00000487252 HSF1Q00613 529 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 KIF5AQ12840 1032 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 TMEM115Q12893 351 aaPredicted RBP11.16□□□□□ -0.62
TRIM56-204ENST00000487252 PTP4A2Q12974 167 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 XRCC4Q13426 336 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 KEAP1Q14145 624 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 NFE2L1Q14494 772 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms