RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CACHD1Q5VU97 1274 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 NECAB2Q7Z6G3 386 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 HBEGFQ99075 208 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 DPY30Q9C005 99 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 CLMPQ9H6B4 373 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 USE1Q9NZ43 259 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 IFT80Q9P2H3 777 aaPredicted RBP25.51■■□□□ 1.67
HLA-C-208ENST00000487245 DNAJB9Q9UBS3 223 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 MANBAO00462 879 aa25.5■■□□□ 1.67
HLA-C-208ENST00000487245 GGT5P36269 586 aa25.5■■□□□ 1.67
HLA-C-208ENST00000487245 DMC1Q14565 340 aa25.5■■□□□ 1.67
HLA-C-208ENST00000487245 RUNDC3AQ59EK9 446 aa25.5■■□□□ 1.67
HLA-C-208ENST00000487245 ZNF773Q6PK81 442 aa25.5■■□□□ 1.67
HLA-C-208ENST00000487245 PLPP6Q8IY26 295 aa25.5■■□□□ 1.67
HLA-C-208ENST00000487245 ADGRG2Q8IZP9 1017 aa25.5■■□□□ 1.67
HLA-C-208ENST00000487245 AURKBQ96GD4 344 aaPredicted RBP25.5■■□□□ 1.67
HLA-C-208ENST00000487245 POLR1BQ9H9Y6 1135 aa25.5■■□□□ 1.67
HLA-C-208ENST00000487245 KLQ9UEF7 1012 aa25.5■■□□□ 1.67
HLA-C-208ENST00000487245 V9GYQ6 96 aa25.5■■□□□ 1.67
HLA-C-208ENST00000487245 TRBV5-3A0A0A0MS03 114 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 C8GP07360 202 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 BMP1P13497 986 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 CSF2RAP15509 400 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 GDF5P43026 501 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 MAPKAPK3Q16644 382 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 IMPG1Q17R60 797 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 ATP13A5Q4VNC0 1218 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 TMEM214Q6NUQ4 689 aaKnown RBP25.49■■□□□ 1.67
HLA-C-208ENST00000487245 KCTD8Q6ZWB6 473 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 SVOPLQ8N434 492 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 SLC32A1Q9H598 525 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 ZDHHC6Q9H6R6 413 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 LRTM1Q9HBL6 345 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 ZNF490Q9ULM2 529 aaPredicted RBP25.49■■□□□ 1.67
HLA-C-208ENST00000487245 GMEB1Q9Y692 573 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 GSTA4O15217 222 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 KRT6AP02538 564 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 KRT6BP04259 564 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 MPC1LP0DKB6 136 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 IL1RNP18510 177 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 NFKBIAP25963 317 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 KRT6CP48668 564 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 SPINT3P49223 89 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 RPIAP49247 311 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 ARHGEF7Q14155 803 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 MYBPC3Q14896 1274 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 MSRB3Q8IXL7 192 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 PJA1Q8NG27 643 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 SLC22A17Q8WUG5 538 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 BRD9Q9H8M2 597 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 PLGRKTQ9HBL7 147 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 CDC14AQ9UNH5 594 aa25.49■■□□□ 1.67
HLA-C-208ENST00000487245 LOC730098B7Z3J9 87 aa25.48■■□□□ 1.67
HLA-C-208ENST00000487245 BNIP3LO60238 219 aa25.48■■□□□ 1.67
HLA-C-208ENST00000487245 CLDN9O95484 217 aa25.48■■□□□ 1.67
HLA-C-208ENST00000487245 LHCGRP22888 699 aa25.48■■□□□ 1.67
HLA-C-208ENST00000487245 AOAHP28039 575 aa25.48■■□□□ 1.67
HLA-C-208ENST00000487245 MTHFRP42898 656 aa25.48■■□□□ 1.67
HLA-C-208ENST00000487245 NRIP1P48552 1158 aa25.48■■□□□ 1.67
HLA-C-208ENST00000487245 PTGR1Q14914 329 aa25.48■■□□□ 1.67
HLA-C-208ENST00000487245 AAK1Q2M2I8 961 aa25.48■■□□□ 1.67
HLA-C-208ENST00000487245 FAM174BQ3ZCQ3 159 aa25.48■■□□□ 1.67
HLA-C-208ENST00000487245 RBM48Q5RL73 367 aaKnown RBP25.48■■□□□ 1.67
HLA-C-208ENST00000487245 ATG9BQ674R7 924 aa25.48■■□□□ 1.67
HLA-C-208ENST00000487245 DPY19L3Q6ZPD9 716 aa25.48■■□□□ 1.67
HLA-C-208ENST00000487245 LRRC70Q7Z2Q7 622 aa25.48■■□□□ 1.67
HLA-C-208ENST00000487245 LIX1Q8N485 282 aa25.48■■□□□ 1.67
HLA-C-208ENST00000487245 SOX17Q9H6I2 414 aaPredicted RBP25.48■■□□□ 1.67
HLA-C-208ENST00000487245 MAGIXQ9H6Y5 334 aa25.48■■□□□ 1.67
HLA-C-208ENST00000487245 HELZP42694 1942 aaKnown RBP25.48■■□□□ 1.67
HLA-C-208ENST00000487245 WASH3PC4AMC7 463 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 H3BMQ9 156 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 KPNA5O15131 536 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 SLC16A5O15375 505 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 PGRP06401 933 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 RETP07949 1114 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 C1SP09871 688 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 PABPC1P11940 636 aaKnown RBP25.47■■□□□ 1.67
HLA-C-208ENST00000487245 CCR7P32248 378 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 HNRNPFP52597 415 aaKnown RBP25.47■■□□□ 1.67
HLA-C-208ENST00000487245 B4GALNT1Q00973 533 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 GBX1Q14549 363 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 TTC23Q5W5X9 447 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 NUDT8Q8WV74 236 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 COG8Q96MW5 612 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 MUS81Q96NY9 551 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 SLC12A9Q9BXP2 914 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 CARS2Q9HA77 564 aaKnown RBP25.47■■□□□ 1.67
HLA-C-208ENST00000487245 PARVBQ9HBI1 364 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 ARL15Q9NXU5 204 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 NIPSNAP3AQ9UFN0 247 aaPredicted RBP25.47■■□□□ 1.67
HLA-C-208ENST00000487245 A0A0J9YVX5 310 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 ELOVL7A1L3X0 281 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 PABPN1LA6NDY0 278 aaKnown RBP25.47■■□□□ 1.67
HLA-C-208ENST00000487245 FAM220BPB1ANY3 271 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 FFAR3O14843 346 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 GPR42O15529 346 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 NUAK1O60285 661 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 UGT2B4P06133 528 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 ZNF30P17039 623 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms