RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 TMEM71Q6P5X7 295 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 ZNF449Q6P9G9 518 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 OTOAQ7RTW8 1153 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 RELL1Q8IUW5 271 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 ZBTB2Q8N680 514 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 ZSCAN1Q8NBB4 408 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 ACVR1CQ8NER5 493 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 GABPB2Q8TAK5 448 aaPredicted RBP12.54□□□□□ -0.4
SSR4-211ENST00000486204 CD200R1Q8TD46 325 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 CCDC74BQ96LY2 380 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 TMEM74Q96NL1 305 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 FERD3LQ96RJ6 166 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 NDNQ99608 321 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 HGH1Q9BTY7 390 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 TWSG1Q9GZX9 223 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 MVB12BQ9H7P6 319 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 PPANQ9NQ55 473 aaKnown RBP12.54□□□□□ -0.4
SSR4-211ENST00000486204 ZFATQ9P243 1243 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 COLEC10Q9Y6Z7 277 aa12.54□□□□□ -0.4
SSR4-211ENST00000486204 FAM159BA6NKW6 160 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 CXorf49A8MYA2 514 aaPredicted RBP12.53□□□□□ -0.4
SSR4-211ENST00000486204 E5RI56 91 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 GSTA2P09210 222 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 CHRM3P20309 590 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 PPP1CAP62136 330 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 CYP4F2P78329 520 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 PLCL1Q15111 1095 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 ACSBG2Q5FVE4 666 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 UNC5DQ6UXZ4 953 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 CYS1Q717R9 158 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 SLC26A11Q86WA9 606 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 ZC3HC1Q86WB0 502 aaKnown RBP12.53□□□□□ -0.4
SSR4-211ENST00000486204 RASGRP3Q8IV61 690 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 PALM2Q8IXS6 379 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 SIDT2Q8NBJ9 832 aaKnown RBP12.53□□□□□ -0.4
SSR4-211ENST00000486204 OR52E1Q8NGJ3 308 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 OR5K2Q8NHB8 316 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 NCSTNQ92542 709 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 AHCYL2Q96HN2 611 aaKnown RBP12.53□□□□□ -0.4
SSR4-211ENST00000486204 GPR21Q99679 349 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 DPYSL5Q9BPU6 564 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 MENTQ9BUN1 341 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 RAB33BQ9H082 229 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 CCDC68Q9H2F9 335 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 KLHL42Q9P2K6 505 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 EPHA6Q9UF33 1036 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 CORO1CQ9ULV4 474 aaPredicted RBP12.53□□□□□ -0.4
SSR4-211ENST00000486204 ICKQ9UPZ9 632 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 RUVBL2Q9Y230 463 aaKnown RBP12.53□□□□□ -0.4
SSR4-211ENST00000486204 ASF1AQ9Y294 204 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 DHRS7Q9Y394 339 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 PCDHGA7Q9Y5G6 932 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 NFS1Q9Y697 457 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 NOTCH2Q04721 2471 aa12.53□□□□□ -0.4
SSR4-211ENST00000486204 OR5K3A6NET4 321 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 PLD2O14939 933 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 MATN4O95460 622 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 RHOXF2BP0C7M4 288 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 CD9P21926 228 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 MPSTP25325 297 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 CDKN2DP55273 166 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 PRKG2Q13237 762 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 TRA2AQ13595 282 aaKnown RBP eCLIP12.52□□□□□ -0.41
SSR4-211ENST00000486204 CUL1Q13616 776 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 MANEAQ5SRI9 462 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 PHF19Q5T6S3 580 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 C3orf62Q6ZUJ4 267 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 ARHGAP22Q7Z5H3 698 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 TBC1D21Q8IYX1 336 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 RCBTB1Q8NDN9 531 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 IFT81Q8WYA0 676 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 FMO2Q99518 471 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 OLFM1Q99784 485 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 RHOXF2Q9BQY4 288 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 ADNPQ9H2P0 1102 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 TRIT1Q9H3H1 467 aaKnown RBP12.52□□□□□ -0.41
SSR4-211ENST00000486204 CDC42EP4Q9H3Q1 356 aaKnown RBP12.52□□□□□ -0.41
SSR4-211ENST00000486204 TFB2MQ9H5Q4 396 aaKnown RBP12.52□□□□□ -0.41
SSR4-211ENST00000486204 NINJ2Q9NZG7 142 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 PLEKHB1Q9UF11 243 aaPredicted RBP12.52□□□□□ -0.41
SSR4-211ENST00000486204 MTRF1LQ9UGC7 380 aaKnown RBP12.52□□□□□ -0.41
SSR4-211ENST00000486204 PCDHGA4Q9Y5G9 962 aa12.52□□□□□ -0.41
SSR4-211ENST00000486204 SPTAN1Q13813 2472 aaKnown RBP12.52□□□□□ -0.41
SSR4-211ENST00000486204 KRT87PA6NCN2 255 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 TMX2-CTNND1H3BSU7 103 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 BTN3A3O00478 584 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 BTN3A1O00481 513 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 HGSO14964 777 aaPredicted RBP12.51□□□□□ -0.41
SSR4-211ENST00000486204 CAPN5O15484 640 aaPredicted RBP12.51□□□□□ -0.41
SSR4-211ENST00000486204 KIF1CO43896 1103 aaKnown RBP12.51□□□□□ -0.41
SSR4-211ENST00000486204 VPS26AO75436 327 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 SPAG6O75602 509 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 ANKRD34CP0C6C1 535 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 LIPCP11150 499 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 AMD1P17707 334 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 FDXRP22570 491 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 CASRP41180 1078 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 PGGT1BP53609 377 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 ABRQ12979 859 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 KRT33BQ14525 404 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms