RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 TBC1D1Q86TI0 1168 aaPredicted RBP5.49□□□□□ -1.53
COPS3-208ENST00000486032 SLC9B2Q86UD5 537 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 NAXDQ8IW45 347 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 SLC35F3Q8IY50 421 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 NAGSQ8N159 534 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 MYO1HQ8N1T3 1032 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 MREGQ8N565 214 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 Q8N9G6 341 aaPredicted RBP5.49□□□□□ -1.53
COPS3-208ENST00000486032 KYQ8NBH2 561 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 OR5AR1Q8NGP9 310 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 SLC37A2Q8TED4 501 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 EEF1AKMT1Q8WVE0 214 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 KCTD4Q8WVF5 259 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 ANKRD49Q8WVL7 239 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 TFGQ92734 400 aaPredicted RBP5.49□□□□□ -1.53
COPS3-208ENST00000486032 KCNJ9Q92806 393 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 GLMNQ92990 594 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 ALKBH8Q96BT7 664 aaKnown RBP5.49□□□□□ -1.53
COPS3-208ENST00000486032 TSPAN17Q96FV3 270 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 SCYL1Q96KG9 808 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 CNDP2Q96KP4 475 aaKnown RBP5.49□□□□□ -1.53
COPS3-208ENST00000486032 LINC00615Q96LM1 132 aaPredicted RBP5.49□□□□□ -1.53
COPS3-208ENST00000486032 APOLD1Q96LR9 279 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 RMDN2Q96LZ7 410 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 FOPNLQ96NB1 174 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 GPR22Q99680 433 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 HGH1Q9BTY7 390 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 FUT8Q9BYC5 575 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 STN1Q9H668 368 aaKnown RBP5.49□□□□□ -1.53
COPS3-208ENST00000486032 SNX15Q9NRS6 342 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 NLGN3Q9NZ94 848 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 STOML1Q9UBI4 398 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 SLC24A2Q9UI40 661 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 TLK1Q9UKI8 766 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 ACSL5Q9ULC5 683 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 PLAGL1Q9UM63 463 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 ASF1AQ9Y294 204 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 MED16Q9Y2X0 877 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 CSNK1G3Q9Y6M4 447 aa5.49□□□□□ -1.53
COPS3-208ENST00000486032 ZFC3H1O60293 1989 aaKnown RBP5.49□□□□□ -1.53
COPS3-208ENST00000486032 HMX2A2RU54 273 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 KRT87PA6NCN2 255 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 NPEPPSL1A6NEC2 478 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 NCF1BA6NI72 391 aaPredicted RBP5.48□□□□□ -1.53
COPS3-208ENST00000486032 GOLGA6L10A6NI86 522 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 NCF1CA8MVU1 366 aaPredicted RBP5.48□□□□□ -1.53
COPS3-208ENST00000486032 CDC7O00311 574 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 BTN3A1O00481 513 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 RGS16O15492 202 aaPredicted RBP5.48□□□□□ -1.53
COPS3-208ENST00000486032 FLRT2O43155 660 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 PCDHGA12O60330 932 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 NOBOXO60393 691 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 CDH16O75309 829 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 GPC4O75487 556 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 GUCA1CO95843 209 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 C2P06681 752 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 GSTM1P09488 218 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 NUDT17P0C025 328 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 GIMD1P0DJR0 217 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 MTHFD1P11586 935 aaKnown RBP5.48□□□□□ -1.53
COPS3-208ENST00000486032 F3P13726 295 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 CD59P13987 128 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 NCF1P14598 390 aaPredicted RBP5.48□□□□□ -1.53
COPS3-208ENST00000486032 SLC2A4P14672 509 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 H2AFXP16104 143 aaPredicted RBP5.48□□□□□ -1.53
COPS3-208ENST00000486032 TYRP1P17643 537 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 AMD1P17707 334 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 CNTFP26441 200 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 MAP4P27816 1152 aaKnown RBP5.48□□□□□ -1.53
COPS3-208ENST00000486032 CRABP2P29373 138 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 ALDH4A1P30038 563 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 SKIV2L2P42285 1042 aaKnown RBP5.48□□□□□ -1.53
COPS3-208ENST00000486032 GRK6P43250 576 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 GLRBP48167 497 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 GSTM4Q03013 218 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 HHEXQ03014 270 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 ZNF844Q08AG5 666 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 DMPKQ09013 629 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 DNAJC3Q13217 504 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 NR0B2Q15466 257 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 AMZ1Q400G9 498 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 CCSMST1Q4G0I0 132 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 C14orf28Q4W4Y0 310 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 ZCCHC8Q6NZY4 707 aaKnown RBP5.48□□□□□ -1.53
COPS3-208ENST00000486032 GUSBP11Q6P575 273 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 TTC23LQ6PF05 361 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 IYDQ6PHW0 289 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 ABRAXAS1Q6UWZ7 409 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 XKR5Q6UX68 686 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 LRRC69Q6ZNQ3 347 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 FRA10AC1Q70Z53 315 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 UBE2R2Q712K3 238 aaPredicted RBP5.48□□□□□ -1.53
COPS3-208ENST00000486032 EFL1Q7Z2Z2 1120 aaKnown RBP5.48□□□□□ -1.53
COPS3-208ENST00000486032 HDXQ7Z353 690 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 KANSL1Q7Z3B3 1105 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 PDZD3Q86UT5 571 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 TAX1BP1Q86VP1 789 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 MARCH9Q86YJ5 346 aa5.48□□□□□ -1.53
COPS3-208ENST00000486032 SRRM1Q8IYB3 904 aaKnown RBP5.48□□□□□ -1.53
COPS3-208ENST00000486032 C4orf33Q8N1A6 199 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms