RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 FERD3LQ96RJ6 166 aa15.38■□□□□ 0.05
APOE-205ENST00000485628 NRTNQ99748 197 aa15.38■□□□□ 0.05
APOE-205ENST00000485628 TMEM9BQ9NQ34 198 aa15.38■□□□□ 0.05
APOE-205ENST00000485628 IMP3Q9NV31 184 aaKnown RBP15.38■□□□□ 0.05
APOE-205ENST00000485628 TSR3Q9UJK0 312 aaKnown RBP15.38■□□□□ 0.05
APOE-205ENST00000485628 DOLKQ9UPQ8 538 aa15.38■□□□□ 0.05
APOE-205ENST00000485628 PCNX2A6NKB5 2137 aa15.38■□□□□ 0.05
APOE-205ENST00000485628 PCM1Q15154 2024 aa15.38■□□□□ 0.05
APOE-205ENST00000485628 EME2A4GXA9 379 aaPredicted RBP15.37■□□□□ 0.05
APOE-205ENST00000485628 LILRA5A6NI73 299 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 SYCE1LA8MT33 242 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 UBXN8O00124 270 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 FLRT2O43155 660 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 DLX3O60479 287 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 ZWINTO95229 277 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 SLC16A8O95907 504 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 ALPPL2P10696 532 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 GLB1P16278 677 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 IMPA1P29218 277 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 ATXN3P54252 364 aaPredicted RBP15.37■□□□□ 0.05
APOE-205ENST00000485628 HHEXQ03014 270 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 GPR18Q14330 331 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 ZYG11AQ6WRX3 759 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 LINC01555Q8NAE3 123 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 OR52E1Q8NGJ3 308 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 OR56A3Q8NH54 315 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 UBTD2Q8WUN7 234 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 ZNF480Q8WV37 535 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 SKA2Q8WVK7 121 aaPredicted RBP15.37■□□□□ 0.05
APOE-205ENST00000485628 CXorf40BQ96DE9 158 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 FAM111AQ96PZ2 611 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 C1QTNF3Q9BXJ4 246 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 NUDT4Q9NZJ9 180 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 SPATA7Q9P0W8 599 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 STOX2Q9P2F5 926 aaPredicted RBP15.37■□□□□ 0.05
APOE-205ENST00000485628 COPG2Q9UBF2 871 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 RAPGEFL1Q9UHV5 662 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 RNF112Q9ULX5 631 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 ICKQ9UPZ9 632 aa15.37■□□□□ 0.05
APOE-205ENST00000485628 A0A1W2PPV9 198 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 FAM221BA6H8Z2 402 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 E7ENX8 843 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 GDF9O60383 454 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 VIPP01282 170 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 CKMT1AP12532 417 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 PKLRP30613 574 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 HSD17B2P37059 387 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 GRK6P43250 576 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 GPR3P46089 330 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 SLC6A12P48065 614 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 HNMTP50135 292 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 TAP2Q03519 686 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 PRKG2Q13237 762 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 SQSTM1Q13501 440 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 PCLAFQ15004 111 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 SULT1C3Q6IMI6 304 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 METTL2BQ6P1Q9 378 aaKnown RBP15.36■□□□□ 0.05
APOE-205ENST00000485628 MBOAT1Q6ZNC8 495 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 PIP4P1Q86T03 277 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 EID2Q8N6I1 236 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 GOLGA6L1Q8N7Z2 621 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 TSNARE1Q96NA8 513 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 TMEM79Q9BSE2 394 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 TRIM54Q9BYV2 358 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 NCKIPSDQ9NZQ3 722 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 OGFRQ9NZT2 677 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 CPSF2Q9P2I0 782 aaKnown RBP15.36■□□□□ 0.05
APOE-205ENST00000485628 TMCO1Q9UM00 188 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 PADI4Q9UM07 663 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 RNF215Q9Y6U7 377 aa15.36■□□□□ 0.05
APOE-205ENST00000485628 C4orf47A7E2U8 309 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 A8MT66 165 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 STX16-NPEPL1H3BU86 382 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 STX16O14662 325 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 TM4SF5O14894 197 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 ANXA5P08758 320 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 CPA3P15088 417 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 ATP5F1P24539 256 aaPredicted RBP15.35■□□□□ 0.05
APOE-205ENST00000485628 MAP4P27816 1152 aaKnown RBP15.35■□□□□ 0.05
APOE-205ENST00000485628 RAB28P51157 221 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 PRKAA2P54646 552 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 EPHA4P54764 986 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 ALDH18A1P54886 795 aaKnown RBP15.35■□□□□ 0.05
APOE-205ENST00000485628 DNAJB13P59910 316 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 PPP2R2AP63151 447 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 PCDH1Q08174 1060 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 SETDB1Q15047 1291 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 PCBP2Q15366 365 aaKnown RBP eCLIP15.35■□□□□ 0.05
APOE-205ENST00000485628 TTC23LQ6PF05 361 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 ADGRF3Q8IZF5 1079 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 ARMC2Q8NEN0 867 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 OR6C4Q8NGE1 309 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 OR2L8Q8NGY9 312 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 FLVCR1-AS1Q8TAF5 88 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 SH3KBP1Q96B97 665 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 SCYL1Q96KG9 808 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 HGH1Q9BTY7 390 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 SGPP1Q9BX95 441 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 OXSMQ9NWU1 459 aa15.35■□□□□ 0.05
APOE-205ENST00000485628 ARL15Q9NXU5 204 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms