RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	FAM171B	Q6P995	826 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	ENPP7	Q6UWV6	458 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	UNC5D	Q6UXZ4	953 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	ZNF517	Q6ZMY9	492 aa	Predicted RBP	3.85	□□□□□ -1.79
FN1-222	ENST00000485567	MCM10	Q7L590	875 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	OTOA	Q7RTW8	1153 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	LONP2	Q86WA8	852 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	DZIP1	Q86YF9	867 aa	Known RBP	3.85	□□□□□ -1.79
FN1-222	ENST00000485567	UNC45B	Q8IWX7	931 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	ARHGAP24	Q8N264	748 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	ZNF441	Q8N8Z8	693 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	NAT8L	Q8N9F0	302 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	MSANTD4	Q8NCY6	345 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	OR8H1	Q8NGG4	311 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	GRK7	Q8WTQ7	553 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	CCDC107	Q8WV48	283 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	RAD54L	Q92698	747 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	SYN2	Q92777	582 aa	Predicted RBP	3.85	□□□□□ -1.79
FN1-222	ENST00000485567	DNASE1L2	Q92874	299 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	OXNAD1	Q96HP4	312 aa	Predicted RBP	3.85	□□□□□ -1.79
FN1-222	ENST00000485567	HES6	Q96HZ4	224 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	PARK7	Q99497	189 aa	Known RBP	3.85	□□□□□ -1.79
FN1-222	ENST00000485567	TM6SF1	Q9BZW5	370 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	CSTL1	Q9H114	145 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	ARRDC1-AS1	Q9H2J1	176 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	TRPC7	Q9HCX4	862 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	ZNF701	Q9NV72	531 aa	Predicted RBP	3.85	□□□□□ -1.79
FN1-222	ENST00000485567	RNF150	Q9ULK6	438 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	KCNK7	Q9Y2U2	307 aa		3.85	□□□□□ -1.79
FN1-222	ENST00000485567	TTC3	P53804	2025 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567		A0A1W2PPI3	338 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567		A4D1N5	150 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	SYNGR3	O43761	229 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	GOSR1	O95249	250 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	BMP15	O95972	392 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	IGKV2-30	P06310	120 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	KRT19	P08727	400 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	SUPT20HL2	P0C7V6	817 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	CBL	P22681	906 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	AZGP1	P25311	298 aa	Known RBP	3.84	□□□□□ -1.79
FN1-222	ENST00000485567	HPD	P32754	393 aa	Predicted RBP	3.84	□□□□□ -1.79
FN1-222	ENST00000485567	PTGER4	P35408	488 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	SOAT1	P35610	550 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	GMPS	P49915	693 aa	Predicted RBP	3.84	□□□□□ -1.79
FN1-222	ENST00000485567	ALDH3A2	P51648	485 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	HSD17B7	P56937	341 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	UBASH3A	P57075	661 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	DSCR9	P59020	149 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	RPS18	P62269	152 aa	Known RBP	3.84	□□□□□ -1.79
FN1-222	ENST00000485567	NFE2L1	Q14494	772 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	SMC1A	Q14683	1233 aa	Known RBP	3.84	□□□□□ -1.79
FN1-222	ENST00000485567	KIR2DS3	Q14952	304 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	RRS1	Q15050	365 aa	Known RBP	3.84	□□□□□ -1.79
FN1-222	ENST00000485567	TCTE1	Q5JU00	501 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	IRAK1BP1	Q5VVH5	260 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	C11orf63	Q6NUN7	778 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	UNQ6126/PRO20091	Q6UXV3	157 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	NUP54	Q7Z3B4	507 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	PIWIL4	Q7Z3Z4	852 aa	Known RBP	3.84	□□□□□ -1.79
FN1-222	ENST00000485567	FAM114A1	Q8IWE2	563 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	TEX9	Q8N6V9	391 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	TRIML1	Q8N9V2	468 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	NHLRC2	Q8NBF2	726 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	FGFBP3	Q8TAT2	258 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	NSMAF	Q92636	917 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	NEUROG1	Q92886	237 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	PTP4A1	Q93096	173 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	LINGO1	Q96FE5	620 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	DUX5	Q96PT3	197 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	LRRC1	Q9BTT6	524 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	TRPV4	Q9HBA0	871 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	PDRG1	Q9NUG6	133 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	VPS18	Q9P253	973 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	RNF7	Q9UBF6	113 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	MTRR	Q9UBK8	725 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	ARMCX3	Q9UH62	379 aa	Predicted RBP	3.84	□□□□□ -1.79
FN1-222	ENST00000485567	XPO7	Q9UIA9	1087 aa	Known RBP	3.84	□□□□□ -1.79
FN1-222	ENST00000485567	TRIM17	Q9Y577	477 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	IGSF1	Q8N6C5	1336 aa		3.84	□□□□□ -1.79
FN1-222	ENST00000485567	TAF1	P21675	1872 aa		3.84	□□□□□ -1.8
FN1-222	ENST00000485567		A0A1W2PS18	150 aa		3.83	□□□□□ -1.8
FN1-222	ENST00000485567		E9PI62	339 aa		3.83	□□□□□ -1.8
FN1-222	ENST00000485567	FAM86B1	E9PN63	330 aa		3.83	□□□□□ -1.8
FN1-222	ENST00000485567	ZNF263	O14978	683 aa		3.83	□□□□□ -1.8
FN1-222	ENST00000485567	HTATSF1	O43719	755 aa	Known RBP	3.83	□□□□□ -1.8
FN1-222	ENST00000485567	LUC7L3	O95232	432 aa	Known RBP	3.83	□□□□□ -1.8
FN1-222	ENST00000485567	BAG4	O95429	457 aa	Known RBP	3.83	□□□□□ -1.8
FN1-222	ENST00000485567	ACSL3	O95573	720 aa		3.83	□□□□□ -1.8
FN1-222	ENST00000485567	TPM2	P07951	284 aa		3.83	□□□□□ -1.8
FN1-222	ENST00000485567	FAM86B2	P0C5J1	330 aa		3.83	□□□□□ -1.8
FN1-222	ENST00000485567	SMIM18	P0DKX4	95 aa		3.83	□□□□□ -1.8
FN1-222	ENST00000485567	ACP2	P11117	423 aa		3.83	□□□□□ -1.8
FN1-222	ENST00000485567	CKMT2	P17540	419 aa		3.83	□□□□□ -1.8
FN1-222	ENST00000485567	WNT5A	P41221	380 aa		3.83	□□□□□ -1.8
FN1-222	ENST00000485567	CDKN2A	P42771	156 aa	Known RBP	3.83	□□□□□ -1.8
FN1-222	ENST00000485567	PDLIM4	P50479	330 aa		3.83	□□□□□ -1.8
FN1-222	ENST00000485567	MFAP3	P55082	362 aa		3.83	□□□□□ -1.8
FN1-222	ENST00000485567	CX3CL1	P78423	397 aa		3.83	□□□□□ -1.8
FN1-222	ENST00000485567	TNK1	Q13470	666 aa		3.83	□□□□□ -1.8
FN1-222	ENST00000485567	SLC39A14	Q15043	492 aa		3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms