RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 PTRHD1Q6GMV3 140 aaKnown RBP11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 TLDC1Q6P9B6 456 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 CDHR3Q6ZTQ4 885 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 MED25Q71SY5 747 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 HPS6Q86YV9 775 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 RASGEF1CQ8N431 466 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 RAB42Q8N4Z0 105 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 PROKR1Q8TCW9 393 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 SGSM3Q96HU1 749 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 OSBPL9Q96SU4 736 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 NAPGQ99747 312 aaPredicted RBP11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 CARD6Q9BX69 1037 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 CATSPERZQ9NTU4 200 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 INTS7Q9NVH2 962 aaKnown RBP11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 BFARQ9NZS9 450 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 SLC2A6Q9UGQ3 507 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 NDOR1Q9UHB4 597 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 SLC39A10Q9ULF5 831 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 TTC7AQ9ULT0 858 aaPredicted RBP11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 SNX12Q9UMY4 172 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 ZNF451Q9Y4E5 1061 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 SEC16AO15027 2179 aa11.54□□□□□ -0.56
SNRNP200-206ENST00000484372 NBASA2RRP1 2371 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 CTAGE9A4FU28 777 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 TTLL8A6PVC2 850 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 BHMG1C9JSJ3 638 aaPredicted RBP11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 PRMT5O14744 637 aaPredicted RBP11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 OR1I1O60431 355 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 DPM1O60762 260 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 CXCR5P32302 372 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 PTGIRP43119 386 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 NPY2RP49146 381 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 CHAF1BQ13112 559 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 IL10RAQ13651 578 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 UBAP2LQ14157 1087 aaKnown RBP11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 ZNF789Q5FWF6 425 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 MLIPQ5VWP3 458 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 DRICH1Q6PGQ1 229 aaPredicted RBP11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 UNC5DQ6UXZ4 953 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 NAPRTQ6XQN6 538 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 TRIM73Q86UV7 250 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 LRRC6Q86X45 466 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 DCUN1D3Q8IWE4 304 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 SLC22A15Q8IZD6 547 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 MPP5Q8N3R9 675 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 OTUD6BQ8N6M0 293 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 CFAP61Q8NHU2 1237 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 DLG3Q92796 817 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 FOPNLQ96NB1 174 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 OR2A14Q96R47 310 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 NDC1Q9BTX1 674 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 RAB11FIP5Q9BXF6 653 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 AP1M1Q9BXS5 423 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 TRIM55Q9BYV6 548 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 IL22Q9GZX6 179 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 EIF2B3Q9NR50 452 aaKnown RBP11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 HOMER3Q9NSC5 361 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 GNPTGQ9UJJ9 305 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 PLCL2Q9UPR0 1127 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 DRG1Q9Y295 367 aaKnown RBP11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 SPTBP11277 2137 aa11.53□□□□□ -0.56
SNRNP200-206ENST00000484372 K7EM74 188 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 PEX12O00623 359 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 CD3EAPO15446 510 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 ZSCAN9O15535 394 aaPredicted RBP11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 VPS4BO75351 444 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 NDUFS3O75489 264 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 S1PR4O95977 384 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 PIM1P11309 404 aaPredicted RBP11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 ETS1P14921 441 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 TCP1P17987 556 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 VARSP26640 1264 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 CCR7P32248 378 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 RPL22P35268 128 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 DEKP35659 375 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 FOLR3P41439 243 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 GRIA1P42261 906 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 MLLT10P55197 1068 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 SESN2P58004 480 aaPredicted RBP11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 BASP1P80723 227 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 DCDP81605 110 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 SARNPP82979 210 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 SSPNQ14714 243 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 COLEC12Q5KU26 742 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 CPZQ66K79 652 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 LCN10Q6JVE6 187 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 RHBDD2Q6NTF9 364 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 FAM198BQ6UWH4 519 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 ZNF534Q76KX8 674 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 SDCCAG8Q86SQ7 713 aaPredicted RBP11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 MAGEC3Q8TD91 643 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 ADAMTS17Q8TE56 1095 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 COG1Q8WTW3 980 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 SKA2Q8WVK7 121 aaPredicted RBP11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 FER1L6-AS2Q96M78 137 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 FAM60AQ9NP50 221 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 SPHK1Q9NYA1 384 aa11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 IFT80Q9P2H3 777 aaPredicted RBP11.52□□□□□ -0.57
SNRNP200-206ENST00000484372 PLAGL1Q9UM63 463 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms