RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 GOLGA8DPQ0D2H9 430 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 MTAPQ13126 283 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 CYLC2Q14093 348 aaPredicted RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 CSHL1Q14406 222 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 WDR43Q15061 677 aaKnown RBP eCLIP4.04□□□□□ -1.76
VPS41-212ENST00000482217 RBBP5Q15291 538 aaKnown RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 CYP1B1Q16678 543 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 SYT16Q17RD7 645 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 NKAIN1Q4KMZ8 207 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 HIKESHIQ53FT3 197 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 AARS2Q5JTZ9 985 aaKnown RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 C6orf136Q5SQH8 315 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 ARMC12Q5T9G4 340 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 RNASEH2BQ5TBB1 312 aaKnown RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 AGBL2Q5U5Z8 902 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 LCN1P1Q5VSP4 162 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 NAPEPLDQ6IQ20 393 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 PODNL1Q6PEZ8 512 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 SCARA5Q6ZMJ2 495 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 ZNF704Q6ZNC4 412 aaPredicted RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 SLC24A5Q71RS6 500 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 TRILQ7L0X0 811 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 LRRC70Q7Z2Q7 622 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 SPATA21Q7Z572 469 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 GRASPQ7Z6J2 395 aaPredicted RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 CENPVQ7Z7K6 275 aaPredicted RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 LDLRAD3Q86YD5 345 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 TICAM1Q8IUC6 712 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 CRYBG2Q8N1P7 616 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 DNAAF3Q8N9W5 541 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 C8orf58Q8NAV2 365 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 TMEM185AQ8NFB2 350 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 ABHD11Q8NFV4 315 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 OR52J3Q8NH60 311 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 CFAP61Q8NHU2 1237 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 FAM110DQ8TAY7 271 aaPredicted RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 RAB3IL1Q8TBN0 382 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 PDCD6IPQ8WUM4 868 aaKnown RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 ASZ1Q8WWH4 475 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 RLN3Q8WXF3 142 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 OVCA2Q8WZ82 227 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 OR1E3Q8WZA6 343 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 DNASE1L2Q92874 299 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 MMABQ96EY8 250 aaPredicted RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 WDYHV1Q96HA8 205 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 C5orf34Q96MH7 638 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 PRR25Q96S07 402 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 ZNF607Q96SK3 696 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 MAP7D2Q96T17 732 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 FSD1LQ9BXM9 530 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 TDRD1Q9BXT4 1180 aaKnown RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 CLPBQ9H078 707 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 PLK3Q9H4B4 646 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 CCDC134Q9H6E4 229 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 DUSP22Q9NRW4 184 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 LIN7CQ9NUP9 197 aaKnown RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 DLL3Q9NYJ7 618 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 ERAP1Q9NZ08 941 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 STX18Q9P2W9 335 aaKnown RBP4.04□□□□□ -1.76
VPS41-212ENST00000482217 CD300AQ9UGN4 299 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 IL20RAQ9UHF4 553 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 CD207Q9UJ71 328 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 TSPAN16Q9UKR8 245 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 AMFRQ9UKV5 643 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 FZD10Q9ULW2 581 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 DDX19BQ9UMR2 479 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 PLCL2Q9UPR0 1127 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 RNF24Q9Y225 148 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 MFHAS1Q9Y4C4 1052 aa4.04□□□□□ -1.76
VPS41-212ENST00000482217 FNDC1Q4ZHG4 1894 aaPredicted RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 LOC105369274A0A096LPK9 316 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 LOC102723532A0A0G2JNH3 316 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 A0A0U1RQJ8 604 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 A0A1W2PPM1 405 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 ERICH2A1L162 156 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 HELTA6NFD8 242 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 C5orf52A6NGY3 159 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 ANKDD1BA6NHY2 528 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 ARHGAP42A6NI28 874 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 ASB14A6NK59 587 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 LINC00473A8K010 186 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 H0YIZ8 118 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 ARHGEF9O43307 516 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 SPRY2O43597 315 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 SULT1B1O43704 296 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 STRNO43815 780 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 RAMP2O60895 175 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 MITFO75030 526 aaPredicted RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 NDUFS6O75380 124 aaKnown RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 SAP30O75446 220 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 TRUB2O95900 331 aaKnown RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 ECDO95905 644 aaPredicted RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 GCP02774 474 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 RLN1P04808 185 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 NPSP0C0P6 89 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 EBLN1P0CF75 366 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 UMPSP11172 480 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 MMP9P14780 707 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 NR1D1P20393 614 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 AZGP1P25311 298 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms