RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 FAM114A2Q9NRY5 505 aa10.27□□□□□ -0.77
SSBP1-210ENST00000481508 NINJ2Q9NZG7 142 aa10.27□□□□□ -0.77
SSBP1-210ENST00000481508 PISDQ9UG56 409 aa10.27□□□□□ -0.77
SSBP1-210ENST00000481508 TDRKHQ9Y2W6 561 aaKnown RBP10.27□□□□□ -0.77
SSBP1-210ENST00000481508 HEBP2Q9Y5Z4 205 aa10.27□□□□□ -0.77
SSBP1-210ENST00000481508 COLEC10Q9Y6Z7 277 aa10.27□□□□□ -0.77
SSBP1-210ENST00000481508 FAM159BA6NKW6 160 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 ARHGEF33A8MVX0 844 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 E5RI56 91 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 F8W8V4 182 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 C1orf105O95561 183 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 MCM3P25205 808 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 NDUFS1P28331 727 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 PKLRP30613 574 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 SRSF1Q07955 248 aaKnown RBP eCLIP10.26□□□□□ -0.77
SSBP1-210ENST00000481508 ZNF460Q14592 562 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 CLPPQ16740 277 aaPredicted RBP10.26□□□□□ -0.77
SSBP1-210ENST00000481508 KLHL38Q2WGJ6 581 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 HECTD2Q5U5R9 776 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 IRGCQ6NXR0 463 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 PCSK4Q6UW60 755 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 TMEM207Q6UWW9 146 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 CYHR1Q6ZMK1 362 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 PIWIL4Q7Z3Z4 852 aaKnown RBP10.26□□□□□ -0.77
SSBP1-210ENST00000481508 STRA8Q7Z7C7 330 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 GALNT7Q86SF2 657 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 TRIM73Q86UV7 250 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 RASGRP3Q8IV61 690 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 PALM2Q8IXS6 379 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 TBC1D21Q8IYX1 336 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 ADGRF3Q8IZF5 1079 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 FBXO39Q8N4B4 442 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 BMPERQ8N8U9 685 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 GPATCH11Q8N954 259 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 LINC01555Q8NAE3 123 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 FLVCR1-AS1Q8TAF5 88 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 DENND1AQ8TEH3 1009 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 FBF1Q8TES7 1133 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 LCN9Q8WX39 176 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 KCNJ9Q92806 393 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 NXPE2Q96DL1 559 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 MAP3K3Q99759 626 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 TWSG1Q9GZX9 223 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 TRIT1Q9H3H1 467 aaKnown RBP10.26□□□□□ -0.77
SSBP1-210ENST00000481508 EPB41L1Q9H4G0 881 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 TFB2MQ9H5Q4 396 aaKnown RBP10.26□□□□□ -0.77
SSBP1-210ENST00000481508 CLMPQ9H6B4 373 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 SPHK1Q9NYA1 384 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 FOXJ2Q9P0K8 574 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 ZFATQ9P243 1243 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 IKZF3Q9UKT9 509 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 DHRS7Q9Y394 339 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 AK5Q9Y6K8 562 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 NOTCH2Q04721 2471 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 HEATR5BQ9P2D3 2071 aa10.26□□□□□ -0.77
SSBP1-210ENST00000481508 RELNP78509 3460 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 A0A087WV48 116 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 IGHV5-51A0A0C4DH38 117 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 PLD2O14939 933 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 PFDN6O15212 129 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 ZW10O43264 779 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 TNFSF15O95150 251 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 MATN4O95460 622 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 TSPAN12O95859 305 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 FAM153BP0C7A2 387 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 MYBL2P10244 700 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 FGF3P11487 239 aaPredicted RBP10.25□□□□□ -0.77
SSBP1-210ENST00000481508 PVRP15151 417 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 FDXRP22570 491 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 ATP5DP30049 168 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 GMPRP36959 345 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 SEPHS1P49903 392 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 TAS2R39P59534 338 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 SH3BP2P78314 561 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 PLOD1Q02809 727 aaPredicted RBP10.25□□□□□ -0.77
SSBP1-210ENST00000481508 KYNUQ16719 465 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 KBTBD12Q3ZCT8 623 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 FAM153CQ494X1 144 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 TEX35Q5T0J7 233 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 ZNF449Q6P9G9 518 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 PAQR3Q6TCH7 311 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 UNC5DQ6UXZ4 953 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 C3orf62Q6ZUJ4 267 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 PRSS42Q7Z5A4 293 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 TAX1BP1Q86VP1 789 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 AMIGO1Q86WK6 493 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 OOSP2Q86WS3 158 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 PLXDC1Q8IUK5 500 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 FAM20CQ8IXL6 584 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 C2orf73Q8N5S3 287 aaPredicted RBP10.25□□□□□ -0.77
SSBP1-210ENST00000481508 WDR36Q8NI36 951 aaKnown RBP10.25□□□□□ -0.77
SSBP1-210ENST00000481508 SKA2Q8WVK7 121 aaPredicted RBP10.25□□□□□ -0.77
SSBP1-210ENST00000481508 ZFPM2Q8WW38 1151 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 DLG3Q92796 817 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 DPYSL5Q9BPU6 564 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 STRADBQ9C0K7 418 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 RAB33BQ9H082 229 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 CCDC68Q9H2F9 335 aa10.25□□□□□ -0.77
SSBP1-210ENST00000481508 CDC42EP4Q9H3Q1 356 aaKnown RBP10.25□□□□□ -0.77
SSBP1-210ENST00000481508 SRMSQ9H3Y6 488 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms