RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 OR6K6Q8NGW6 343 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 LRRC20Q8TCA0 184 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 HAPLN3Q96S86 360 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 C14orf166Q9Y224 244 aaKnown RBP9.38□□□□□ -0.91
VEGFA-212ENST00000480614 IRF6O14896 467 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 RCBTB2O95199 551 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 FSHRP23945 695 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 ACTR1BP42025 376 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 C7orf57Q8NEG2 295 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 INPP4AQ96PE3 977 aaPredicted RBP9.38□□□□□ -0.91
VEGFA-212ENST00000480614 CYP2S1Q96SQ9 504 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 ERVK-5Q9HDB9 667 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 TRNAU1APQ9NX07 287 aaKnown RBP9.38□□□□□ -0.91
VEGFA-212ENST00000480614 KIAA1217Q5T5P2 1943 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 TEX13CA0A0J9YWL9 993 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 ATP6AP2O75787 350 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 MPIP34949 423 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 SNTA1Q13424 505 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 PDSS1Q5T2R2 415 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 ADGRD1Q6QNK2 874 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 HSDL2Q6YN16 418 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 GPR151Q8TDV0 419 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 MARCH7Q9H992 704 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 MRPS30Q9NP92 439 aaKnown RBP9.38□□□□□ -0.91
VEGFA-212ENST00000480614 MAU2Q9Y6X3 613 aa9.38□□□□□ -0.91
VEGFA-212ENST00000480614 SLC33A1O00400 549 aaPredicted RBP9.37□□□□□ -0.91
VEGFA-212ENST00000480614 COQ9O75208 318 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 GRK5P34947 590 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 ENPP2Q13822 863 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 NUDT13Q86X67 352 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 LRRC46Q96FV0 321 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 WRAP53Q9BUR4 548 aaKnown RBP9.37□□□□□ -0.91
VEGFA-212ENST00000480614 SPTAN1Q13813 2472 aaKnown RBP9.37□□□□□ -0.91
VEGFA-212ENST00000480614 GABRDO14764 452 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 MVKQ03426 396 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 ADAM15Q13444 863 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 PLEKHG6Q3KR16 790 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 UBXN11Q5T124 520 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 CCSAPQ6IQ19 270 aaPredicted RBP9.37□□□□□ -0.91
VEGFA-212ENST00000480614 NIPAL1Q6NVV3 410 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 GET4Q7L5D6 327 aaPredicted RBP9.37□□□□□ -0.91
VEGFA-212ENST00000480614 ZNF224Q9NZL3 707 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 ALG5Q9Y673 324 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 IRAK2O43187 625 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 ANXA8P13928 327 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 C4orf46Q504U0 113 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 SPPL2CQ8IUH8 684 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 C12orf29Q8N999 325 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 HEPHQ9BQS7 1158 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 MECRQ9BV79 373 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 TRIM36Q9NQ86 728 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 TMED5Q9Y3A6 229 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 CXCR6O00574 342 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 GADD45AP24522 165 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 NCBP2P52298 156 aaKnown RBP eCLIP9.37□□□□□ -0.91
VEGFA-212ENST00000480614 TAS2R40P59535 323 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 C10orf62Q5T681 223 aaPredicted RBP9.37□□□□□ -0.91
VEGFA-212ENST00000480614 SATL1Q86VE3 508 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 SLAIN1Q8ND83 568 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 OVCA2Q8WZ82 227 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 KCTD7Q96MP8 289 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 P2RX2Q9UBL9 471 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 HES2Q9Y543 173 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 TSPAN8P19075 237 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 EGFLAMQ63HQ2 1017 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 CMC1Q7Z7K0 106 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 NCSTNQ92542 709 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 LPGAT1Q92604 370 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 ACBD6Q9BR61 282 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 TBL1XR1Q9BZK7 514 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 NMUR2Q9GZQ4 415 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 USP29Q9HBJ7 922 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 DGKBQ9Y6T7 804 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 KLRC4O43908 158 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 PLEKHG4Q58EX7 1191 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 LINGO2Q7L985 606 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 RALGPS2Q86X27 583 aaPredicted RBP9.37□□□□□ -0.91
VEGFA-212ENST00000480614 GHDCQ8N2G8 530 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 GSTCDQ8NEC7 633 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 OR56A1Q8NGH5 318 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 CITED4Q96RK1 184 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 SLCO1B3Q9NPD5 702 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 EFR3AQ14156 821 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 SMARCD3Q6STE5 483 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 ALG3Q92685 438 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 OSTF1Q92882 214 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 NKD1Q969G9 470 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 TUBGCP5Q96RT8 1024 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 CCDC86Q9H6F5 360 aaKnown RBP9.37□□□□□ -0.91
VEGFA-212ENST00000480614 ABCB9Q9NP78 766 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 DDX4Q9NQI0 724 aaKnown RBP9.37□□□□□ -0.91
VEGFA-212ENST00000480614 SPATA7Q9P0W8 599 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 PCDHA2Q9Y5H9 948 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 DNAJB1P25685 340 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 ARF3P61204 181 aaPredicted RBP9.37□□□□□ -0.91
VEGFA-212ENST00000480614 ARF1P84077 181 aaKnown RBP9.37□□□□□ -0.91
VEGFA-212ENST00000480614 CAP1Q01518 475 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 ARFRP1Q13795 201 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 C6orf52Q5T4I8 152 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 OR5K1Q8NHB7 308 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms