RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 WIPF3A6NGB9 483 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 A6NL46 340 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 BHMG1C9JSJ3 638 aaPredicted RBP12.52□□□□□ -0.41
ABCF3-212ENST00000478288 PEX12O00623 359 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 METTL18O95568 372 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 OR56A5P0C7T3 313 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 PRSS56P0CW18 603 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 CBSLP0DN79 551 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 OTX2P32243 289 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 FOXN2P32314 431 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 CBSP35520 551 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 GCGRP47871 477 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 NKAIN1Q4KMZ8 207 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 SYTL3Q4VX76 610 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 DNAJC21Q5F1R6 531 aaKnown RBP12.52□□□□□ -0.41
ABCF3-212ENST00000478288 TRIM73Q86UV7 250 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 GALNT16Q8N428 558 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 DNAJC22Q8N4W6 341 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 FAM71DQ8N9W8 422 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 DENND1AQ8TEH3 1009 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 DLG3Q92796 817 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 FKBP10Q96AY3 582 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 PTERQ96BW5 349 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 TTC1Q99614 292 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 BARD1Q99728 777 aaKnown RBP12.52□□□□□ -0.41
ABCF3-212ENST00000478288 TXLNGQ9NUQ3 528 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 SPHK1Q9NYA1 384 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 IFT80Q9P2H3 777 aaPredicted RBP12.52□□□□□ -0.41
ABCF3-212ENST00000478288 NDOR1Q9UHB4 597 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 GPN3Q9UHW5 284 aaPredicted RBP12.52□□□□□ -0.41
ABCF3-212ENST00000478288 PLCL2Q9UPR0 1127 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 PTRH2Q9Y3E5 179 aaKnown RBP12.52□□□□□ -0.41
ABCF3-212ENST00000478288 DUSP10Q9Y6W6 482 aa12.52□□□□□ -0.41
ABCF3-212ENST00000478288 CCDC78A2IDD5 438 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 GRID2IPA4D2P6 1211 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 SOWAHDA6NJG2 315 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 MIF4GDA9UHW6 222 aaKnown RBP12.51□□□□□ -0.41
ABCF3-212ENST00000478288 HCRTR1O43613 425 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 ONECUT2O95948 504 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 TPBGLP0DKB5 382 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 TPH1P17752 444 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 PKLRP30613 574 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 RAB28P51157 221 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 NAP1L1P55209 391 aaKnown RBP12.51□□□□□ -0.41
ABCF3-212ENST00000478288 MRPL49Q13405 166 aaKnown RBP12.51□□□□□ -0.41
ABCF3-212ENST00000478288 DEFB110Q30KQ9 67 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 YOD1Q5VVQ6 348 aaPredicted RBP12.51□□□□□ -0.41
ABCF3-212ENST00000478288 MLIPQ5VWP3 458 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 AADACL2Q6P093 401 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 PPP1R32Q7Z5V6 425 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 SLC22A15Q8IZD6 547 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 UBL4BQ8N7F7 174 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 OR13J1Q8NGT2 312 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 SLC35B2Q8TB61 432 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 PEX13Q92968 403 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 SLC22A18Q96BI1 424 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 SNRNP40Q96DI7 357 aaKnown RBP12.51□□□□□ -0.41
ABCF3-212ENST00000478288 NDC1Q9BTX1 674 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 MFRPQ9BY79 579 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 ZNF552Q9H707 407 aaPredicted RBP12.51□□□□□ -0.41
ABCF3-212ENST00000478288 WDR54Q9H977 334 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 P4HTMQ9NXG6 502 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 REXO2Q9Y3B8 237 aaKnown RBP12.51□□□□□ -0.41
ABCF3-212ENST00000478288 PRSS21Q9Y6M0 314 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 CSMD1Q96PZ7 3565 aa12.51□□□□□ -0.41
ABCF3-212ENST00000478288 HEATR5BQ9P2D3 2071 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 HEATR9A2RTY3 570 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 CCDC162PA2VCL2 907 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 AGPSO00116 658 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 SUN1O94901 812 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 FKBP9O95302 570 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 CBX6O95503 412 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 ALBP02768 609 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 RPN2P04844 631 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 PTMAP06454 111 aaKnown RBP12.5□□□□□ -0.41
ABCF3-212ENST00000478288 RNF224P0DH78 156 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 PEBP1P30086 187 aaKnown RBP12.5□□□□□ -0.41
ABCF3-212ENST00000478288 ARSFP54793 590 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 GDF10P55107 478 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 ACVR1Q04771 509 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 CDH17Q12864 832 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 AIMP2Q13155 320 aaKnown RBP12.5□□□□□ -0.41
ABCF3-212ENST00000478288 PLEKHN1Q494U1 663 aaPredicted RBP12.5□□□□□ -0.41
ABCF3-212ENST00000478288 CRB2Q5IJ48 1285 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 C1orf189Q5VU69 101 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 AFTPHQ6ULP2 937 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 Q6ZS92 163 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 NLRP9Q7RTR0 991 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 SYCE1Q8N0S2 351 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 ZNF655Q8N720 491 aaPredicted RBP12.5□□□□□ -0.41
ABCF3-212ENST00000478288 COG1Q8WTW3 980 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 RANBP9Q96S59 729 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 MENTQ9BUN1 341 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 TSSK1BQ9BXA7 367 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 LACRTQ9GZZ8 138 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 SPRTNQ9H040 489 aaPredicted RBP12.5□□□□□ -0.41
ABCF3-212ENST00000478288 SLC26A1Q9H2B4 701 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 LUZP4Q9P127 313 aa12.5□□□□□ -0.41
ABCF3-212ENST00000478288 DHCR7Q9UBM7 475 aaKnown RBP12.5□□□□□ -0.41
ABCF3-212ENST00000478288 AMFRQ9UKV5 643 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms