RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 KIR3DX1Q9H7L2 352 aa11.14□□□□□ -0.63
CBWD3-206ENST00000478048 ROPN1Q9HAT0 212 aaPredicted RBP11.14□□□□□ -0.63
CBWD3-206ENST00000478048 NCKIPSDQ9NZQ3 722 aa11.14□□□□□ -0.63
CBWD3-206ENST00000478048 TDRKHQ9Y2W6 561 aaKnown RBP11.14□□□□□ -0.63
CBWD3-206ENST00000478048 HEBP2Q9Y5Z4 205 aa11.14□□□□□ -0.63
CBWD3-206ENST00000478048 COLEC10Q9Y6Z7 277 aa11.14□□□□□ -0.63
CBWD3-206ENST00000478048 DCHS1Q96JQ0 3298 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 SPAARA0A1B0GVQ0 90 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 GFYI3L273 518 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 GOLGA8RI6L899 631 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 B4GAT1O43505 415 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 ZBTB14O43829 449 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 CD1DP15813 335 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 CSRP1P21291 193 aaKnown RBP11.13□□□□□ -0.63
CBWD3-206ENST00000478048 ALDH4A1P30038 563 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 DUSP3P51452 185 aaPredicted RBP11.13□□□□□ -0.63
CBWD3-206ENST00000478048 GRB7Q14451 532 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 RASA2Q15283 850 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 CCDC157Q569K6 752 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 TIFABQ6ZNK6 161 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 UBE2R2Q712K3 238 aaPredicted RBP11.13□□□□□ -0.63
CBWD3-206ENST00000478048 VASH1Q7L8A9 365 aaPredicted RBP11.13□□□□□ -0.63
CBWD3-206ENST00000478048 LINC00528Q8N1L1 170 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 PLD6Q8N2A8 252 aaKnown RBP11.13□□□□□ -0.63
CBWD3-206ENST00000478048 OR52E1Q8NGJ3 308 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 NXNL1Q96CM4 212 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 MTBPQ96DY7 904 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 PDLIM5Q96HC4 596 aaKnown RBP11.13□□□□□ -0.63
CBWD3-206ENST00000478048 FOPNLQ96NB1 174 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 SLC38A3Q99624 504 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 CCDC3Q9BQI4 270 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 TMEM109Q9BVC6 243 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 TRIT1Q9H3H1 467 aaKnown RBP11.13□□□□□ -0.63
CBWD3-206ENST00000478048 SLC32A1Q9H598 525 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 STN1Q9H668 368 aaKnown RBP11.13□□□□□ -0.63
CBWD3-206ENST00000478048 XKR8Q9H6D3 395 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 MVB12BQ9H7P6 319 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 PPCSQ9HAB8 311 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 IGSF5Q9NSI5 407 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 ARGLU1Q9NWB6 273 aaPredicted RBP11.13□□□□□ -0.63
CBWD3-206ENST00000478048 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.13□□□□□ -0.63
CBWD3-206ENST00000478048 TLK1Q9UKI8 766 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 ACOT9Q9Y305 439 aa11.13□□□□□ -0.63
CBWD3-206ENST00000478048 DCDC2BA2VCK2 349 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 NPEPPSL1A6NEC2 478 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 BTN3A1O00481 513 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 TYRP1P17643 537 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 NDUFS1P28331 727 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 NOVA1P51513 510 aaKnown RBP11.12□□□□□ -0.63
CBWD3-206ENST00000478048 NR1D2Q14995 579 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 TSNQ15631 228 aaKnown RBP11.12□□□□□ -0.63
CBWD3-206ENST00000478048 PHKG1Q16816 387 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 KRT71Q3SY84 523 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 CEP85LQ5SZL2 805 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 NKAIN2Q5VXU1 208 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 LRRC8EQ6NSJ5 796 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 SPRED1Q7Z699 444 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 GLRX5Q86SX6 157 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 TBC1D1Q86TI0 1168 aaPredicted RBP11.12□□□□□ -0.63
CBWD3-206ENST00000478048 SLCO6A1Q86UG4 719 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 DCUN1D3Q8IWE4 304 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 OR6C4Q8NGE1 309 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 NAT6Q93015 286 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 PTERQ96BW5 349 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 IL17FQ96PD4 163 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 DERL2Q9GZP9 239 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 PCMTD2Q9NV79 361 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 ZNF358Q9NW07 568 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 KNTC1P50748 2209 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 IGHV1OR21-1A0A087WYE8 117 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 A0A087X1B8 175 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 A0A1W2PQM1 296 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 LILRA5A6NI73 299 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 CATP04040 527 aaKnown RBP11.12□□□□□ -0.63
CBWD3-206ENST00000478048 MPOP05164 745 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 LTA4HP09960 611 aaKnown RBP11.12□□□□□ -0.63
CBWD3-206ENST00000478048 PNLIPP16233 465 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 KRT15P19012 456 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 MAPK9P45984 424 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 KCNC1P48547 511 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 CCL7P80098 99 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 CFHR1Q03591 330 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 PLCL1Q15111 1095 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 AMZ1Q400G9 498 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 TAF1BQ53T94 588 aaPredicted RBP11.12□□□□□ -0.63
CBWD3-206ENST00000478048 SBSNQ6UWP8 590 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 MBOAT1Q6ZNC8 495 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 SH2D5Q6ZV89 423 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 RBM12BQ8IXT5 1001 aaKnown RBP11.12□□□□□ -0.63
CBWD3-206ENST00000478048 RIBC1Q8N443 379 aaPredicted RBP11.12□□□□□ -0.63
CBWD3-206ENST00000478048 AVL9Q8NBF6 648 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 OR4E2Q8NGC2 313 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 RSC1A1Q92681 617 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 SH3KBP1Q96B97 665 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 GPR78Q96P69 363 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 MENTQ9BUN1 341 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 SLC12A9Q9BXP2 914 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.12□□□□□ -0.63
CBWD3-206ENST00000478048 UCK1Q9HA47 277 aa11.12□□□□□ -0.63
CBWD3-206ENST00000478048 KCNK4Q9NYG8 393 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms