RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 GON4LQ3T8J9 2241 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 POLQO75417 2590 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 ATMQ13315 3056 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 ARL5CA6NH57 179 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 PRR23D1E9PI22 279 aaPredicted RBP4.59□□□□□ -1.67
VPS50-214ENST00000477935 USP9YO00507 2555 aaPredicted RBP4.59□□□□□ -1.67
VPS50-214ENST00000477935 ZMYM6O95789 1325 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 AFPP02771 609 aaKnown RBP4.59□□□□□ -1.67
VPS50-214ENST00000477935 PRR23D2P0DMB1 279 aaPredicted RBP4.59□□□□□ -1.67
VPS50-214ENST00000477935 POU1F1P28069 291 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 FMO4P31512 558 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 OR1D2P34982 312 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 TRPC3Q13507 836 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 FLNCQ14315 2725 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 DMC1Q14565 340 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 CEP55Q53EZ4 464 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 LYSMD4Q5XG99 296 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 PRSS55Q6UWB4 352 aaPredicted RBP4.59□□□□□ -1.67
VPS50-214ENST00000477935 NEK10Q6ZWH5 1172 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 TMPRSS12Q86WS5 348 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 CEP57Q86XR8 500 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 TMTC1Q8IUR5 882 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 NAXDQ8IW45 347 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 CCDC60Q8IWA6 550 aaPredicted RBP4.59□□□□□ -1.67
VPS50-214ENST00000477935 ITPRIPQ8IWB1 547 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 SMAP1Q8IYB5 467 aaPredicted RBP4.59□□□□□ -1.67
VPS50-214ENST00000477935 FAM9BQ8IZU0 186 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 TSTD1Q8NFU3 115 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 FGF11Q92914 225 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 B3GALT6Q96L58 329 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 CNOT6LQ96LI5 555 aaKnown RBP4.59□□□□□ -1.67
VPS50-214ENST00000477935 LRFN5Q96NI6 719 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 NUF2Q9BZD4 464 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 PSTPIP2Q9H939 334 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 TBC1D22BQ9NU19 505 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 AGPAT5Q9NUQ2 364 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 GTSE1Q9NYZ3 720 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 SLC25A10Q9UBX3 287 aaPredicted RBP4.59□□□□□ -1.67
VPS50-214ENST00000477935 MAD2L2Q9UI95 211 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 PCDHGB1Q9Y5G3 927 aa4.59□□□□□ -1.67
VPS50-214ENST00000477935 ABCA7Q8IZY2 2146 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 BTBD18B2RXH4 712 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 PRRG1O14668 218 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 HOXC11O43248 304 aaPredicted RBP4.58□□□□□ -1.68
VPS50-214ENST00000477935 AP5Z1O43299 807 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 CREB3O43889 395 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 TACC1O75410 805 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 CSDE1O75534 798 aaKnown RBP4.58□□□□□ -1.68
VPS50-214ENST00000477935 GJB3O75712 270 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 CCNE2O96020 404 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 PYGLP06737 847 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 ZNF883P0CG24 379 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 AXLP30530 894 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 PIGAP37287 484 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 ITGB3BPQ13352 177 aaPredicted RBP4.58□□□□□ -1.68
VPS50-214ENST00000477935 DHX34Q14147 1143 aaKnown RBP4.58□□□□□ -1.68
VPS50-214ENST00000477935 VEPH1Q14D04 833 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 TAF11Q15544 211 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 XKR9Q5GH70 373 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 NAA35Q5VZE5 725 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 TMEM81Q6P7N7 255 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 H1FNTQ75WM6 255 aaPredicted RBP4.58□□□□□ -1.68
VPS50-214ENST00000477935 SHFQ7M4L6 423 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 NIPA1Q7RTP0 329 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 GPAT4Q86UL3 456 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 C11orf65Q8NCR3 313 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 OLIG1Q8TAK6 271 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 ERGIC1Q969X5 290 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 TCEAL4Q96EI5 215 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 CCDC51Q96ER9 411 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 P2RY13Q9BPV8 354 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 JPH2Q9BR39 696 aaPredicted RBP4.58□□□□□ -1.68
VPS50-214ENST00000477935 UBAC1Q9BSL1 405 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 FUZQ9BT04 418 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 HEMGNQ9BXL5 484 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 FAM124BQ9H5Z6 455 aaPredicted RBP4.58□□□□□ -1.68
VPS50-214ENST00000477935 ASAH2Q9NR71 780 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 CISD1Q9NZ45 108 aaKnown RBP4.58□□□□□ -1.68
VPS50-214ENST00000477935 MTRRQ9UBK8 725 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 CTNNAL1Q9UBT7 734 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 HSPB7Q9UBY9 170 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 TBX20Q9UMR3 447 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 CARD8Q9Y2G2 431 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 DOCK6Q96HP0 2047 aa4.58□□□□□ -1.68
VPS50-214ENST00000477935 PLXNB3Q9ULL4 1909 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 WNT9BO14905 357 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 ADAM12O43184 909 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 HSPA12AO43301 675 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 TRAPPC3O43617 180 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 KLK8O60259 260 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 NDUFB4O95168 129 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 FGF19O95750 216 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 GNSP15586 552 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 ITGAXP20702 1163 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 BCKDHBP21953 392 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 ACTN2P35609 894 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 GGT5P36269 586 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 P2RY2P41231 377 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 CCR2P41597 374 aa4.57□□□□□ -1.68
VPS50-214ENST00000477935 PTGER3P43115 390 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms