RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ETV3P41162 512 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 BDKRB1P46663 353 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 PSMD8P48556 350 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 SGSHP51688 502 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 PLA2G16P53816 162 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 CDKL1Q00532 357 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 PIGFQ07326 219 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 HSF5Q4G112 596 aaPredicted RBP10.78□□□□□ -0.68
COL27A1-204ENST00000477421 C22orf39Q6P5X5 142 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 RSPO2Q6UXX9 243 aaPredicted RBP10.78□□□□□ -0.68
COL27A1-204ENST00000477421 DEF8Q6ZN54 512 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 GRASPQ7Z6J2 395 aaPredicted RBP10.78□□□□□ -0.68
COL27A1-204ENST00000477421 DSG4Q86SJ6 1040 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 CCDC103Q8IW40 242 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 PIK3C3Q8NEB9 887 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 NUDT8Q8WV74 236 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 SLC30A3Q99726 388 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 MCMBPQ9BTE3 642 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 EQTNQ9NQ60 294 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 LY75O60449 1722 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 DYTNA2CJ06 578 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 KRT87PA6NCN2 255 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 FAM220BPB1ANY3 271 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 LEFTY2O00292 366 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 ALDOCP09972 364 aaKnown RBP10.78□□□□□ -0.68
COL27A1-204ENST00000477421 SLC35G4P0C7Q5 338 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 UMPSP11172 480 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 FMO3P31513 532 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 NR1D2Q14995 579 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 CYP27C1Q4G0S4 372 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 TMEM25Q86YD3 366 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 FAM81AQ8TBF8 368 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 GIPC3Q8TF64 312 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 KLHL25Q9H0H3 589 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 TPK1Q9H3S4 243 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 IL26Q9NPH9 171 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 TDP1Q9NUW8 608 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 DUS2Q9NX74 493 aaKnown RBP10.78□□□□□ -0.68
COL27A1-204ENST00000477421 GALNT8Q9NY28 637 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 ZNF510Q9Y2H8 683 aa10.78□□□□□ -0.68
COL27A1-204ENST00000477421 MANBAO00462 879 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 OR10H3O60404 316 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 NADKO95544 446 aaPredicted RBP10.77□□□□□ -0.68
COL27A1-204ENST00000477421 DDX5P17844 614 aaKnown RBP10.77□□□□□ -0.68
COL27A1-204ENST00000477421 TTKP33981 857 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 TMED10P49755 219 aaKnown RBP10.77□□□□□ -0.68
COL27A1-204ENST00000477421 EEFSECP57772 596 aaKnown RBP10.77□□□□□ -0.68
COL27A1-204ENST00000477421 NTHL1P78549 312 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 CAP1Q01518 475 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 EPS8Q12929 822 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 USP39Q53GS9 565 aaKnown RBP10.77□□□□□ -0.68
COL27A1-204ENST00000477421 BLOC1S3Q6QNY0 202 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 XKR5Q6UX68 686 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 MTSS1LQ765P7 747 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 MMAAQ8IVH4 418 aaKnown RBP10.77□□□□□ -0.68
COL27A1-204ENST00000477421 OR8H2Q8N162 312 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 OR4K1Q8NGD4 311 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 OR8D1Q8WZ84 308 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 GTPBP3Q969Y2 492 aaKnown RBP10.77□□□□□ -0.68
COL27A1-204ENST00000477421 MYEOVQ96EZ4 313 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 ZFYVE19Q96K21 471 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 MUS81Q96NY9 551 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 MGME1Q9BQP7 344 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 C1QTNF1Q9BXJ1 281 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 TRIM45Q9H8W5 580 aaPredicted RBP10.77□□□□□ -0.68
COL27A1-204ENST00000477421 AASDHPPTQ9NRN7 309 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 THG1LQ9NWX6 298 aaKnown RBP10.77□□□□□ -0.68
COL27A1-204ENST00000477421 ZIM2Q9NZV7 527 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 IFT80Q9P2H3 777 aaPredicted RBP10.77□□□□□ -0.68
COL27A1-204ENST00000477421 PCTPQ9UKL6 214 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 USP22Q9UPT9 525 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 SAMD4AQ9UPU9 718 aaKnown RBP10.77□□□□□ -0.68
COL27A1-204ENST00000477421 SHROOM3Q8TF72 1996 aa10.77□□□□□ -0.68
COL27A1-204ENST00000477421 ISM1B1AKI9 464 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 UBFD1O14562 309 aaKnown RBP10.77□□□□□ -0.69
COL27A1-204ENST00000477421 STX16O14662 325 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 FGBP02675 491 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 NR2F1P10589 423 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 CCL5P13501 91 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 BPIP17213 487 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 PTPN2P17706 415 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 DNAJB1P25685 340 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 HOXD9P28356 352 aaPredicted RBP10.77□□□□□ -0.69
COL27A1-204ENST00000477421 OXTRP30559 389 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 RPS7P62081 194 aaKnown RBP10.77□□□□□ -0.69
COL27A1-204ENST00000477421 INTS11Q5TA45 600 aaKnown RBP10.77□□□□□ -0.69
COL27A1-204ENST00000477421 FAM180BQ6P0A1 224 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 BEND5Q7L4P6 421 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 PATL1Q86TB9 770 aaKnown RBP10.77□□□□□ -0.69
COL27A1-204ENST00000477421 RETREG3Q86VR2 466 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 CD200R1Q8TD46 325 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 GATA6Q92908 595 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 RANBP9Q96S59 729 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 TMEM175Q9BSA9 504 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 HTATIP2Q9BUP3 242 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 CD244Q9BZW8 370 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 OR51B5Q9H339 312 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 ARNT2Q9HBZ2 717 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 CMTM6Q9NX76 183 aa10.77□□□□□ -0.69
COL27A1-204ENST00000477421 MTRRQ9UBK8 725 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms