RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 RAP2AP10114 183 aa16.08■□□□□ 0.16
TMEM53-208ENST00000476724 CDH2P19022 906 aaPredicted RBP16.08■□□□□ 0.16
TMEM53-208ENST00000476724 CAPGP40121 348 aa16.08■□□□□ 0.16
TMEM53-208ENST00000476724 RPIAP49247 311 aa16.08■□□□□ 0.16
TMEM53-208ENST00000476724 TSPAN33Q86UF1 283 aa16.08■□□□□ 0.16
TMEM53-208ENST00000476724 POP5Q969H6 163 aaKnown RBP16.08■□□□□ 0.16
TMEM53-208ENST00000476724 LMLNQ96KR4 655 aa16.08■□□□□ 0.16
TMEM53-208ENST00000476724 ZNF641Q96N77 438 aaPredicted RBP16.08■□□□□ 0.16
TMEM53-208ENST00000476724 ZNF583Q96ND8 569 aa16.08■□□□□ 0.16
TMEM53-208ENST00000476724 MCCC1Q96RQ3 725 aaPredicted RBP16.08■□□□□ 0.16
TMEM53-208ENST00000476724 SEPHS2Q99611 448 aa16.08■□□□□ 0.16
TMEM53-208ENST00000476724 UGT2B28Q9BY64 529 aa16.08■□□□□ 0.16
TMEM53-208ENST00000476724 OSBPL6Q9BZF3 934 aa16.08■□□□□ 0.16
TMEM53-208ENST00000476724 C1orf109Q9NX04 203 aa16.08■□□□□ 0.16
TMEM53-208ENST00000476724 H0YAE9 185 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 H3BSA7 217 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 FFAR3O14843 346 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 GPR42O15529 346 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 SEC22BO75396 215 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 POP4O95707 220 aaKnown RBP16.07■□□□□ 0.16
TMEM53-208ENST00000476724 C8GP07360 202 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 BMP1P13497 986 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 NRIP1P48552 1158 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 MTPNP58546 118 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 ESRRGP62508 458 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 CHRNB3Q05901 458 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 ZNF77Q15935 545 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 LRRC66Q68CR7 880 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 ASTLQ6HA08 431 aaPredicted RBP16.07■□□□□ 0.16
TMEM53-208ENST00000476724 PDE12Q6L8Q7 609 aaKnown RBP16.07■□□□□ 0.16
TMEM53-208ENST00000476724 TMC5Q6UXY8 1006 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 PATL1Q86TB9 770 aaKnown RBP16.07■□□□□ 0.16
TMEM53-208ENST00000476724 RGL4Q8IZJ4 473 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 DTWD1Q8N5C7 304 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 VN1R2Q8NFZ6 395 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 OR52E4Q8NGH9 312 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 GTF2H4Q92759 462 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 CEP44Q9C0F1 390 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 CLMPQ9H6B4 373 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 RSL24D1Q9UHA3 163 aaKnown RBP16.07■□□□□ 0.16
TMEM53-208ENST00000476724 USP22Q9UPT9 525 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 FADS3Q9Y5Q0 445 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 IGLV3-16A0A075B6K0 115 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 A0A1B0GTW7 788 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 A8MX80 341 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 PRSS23O95084 383 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 HOXB6P17509 224 aaKnown RBP16.07■□□□□ 0.16
TMEM53-208ENST00000476724 HLA-FP30511 346 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 CTSOP43234 321 aaPredicted RBP16.07■□□□□ 0.16
TMEM53-208ENST00000476724 CDK9P50750 372 aaKnown RBP16.07■□□□□ 0.16
TMEM53-208ENST00000476724 PTSQ03393 145 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 C22orf39Q6P5X5 142 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 ABRAXAS1Q6UWZ7 409 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 LRRC70Q7Z2Q7 622 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 ADGRG2Q8IZP9 1017 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 ZNF786Q8N393 782 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 LIX1Q8N485 282 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 OR2T12Q8NG77 320 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 MAGEE2Q8TD90 523 aaPredicted RBP16.07■□□□□ 0.16
TMEM53-208ENST00000476724 DTNBP1Q96EV8 351 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 HIC2Q96JB3 615 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 VPS50Q96JG6 964 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 RPL10LQ96L21 214 aaKnown RBP16.07■□□□□ 0.16
TMEM53-208ENST00000476724 SLC12A9Q9BXP2 914 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 PIF1Q9H611 641 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 ARL15Q9NXU5 204 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 VAPAQ9P0L0 249 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 SLC25A13Q9UJS0 675 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 PRRC2BQ5JSZ5 2229 aaKnown RBP16.07■□□□□ 0.16
TMEM53-208ENST00000476724 C5orf42Q9H799 3197 aa16.07■□□□□ 0.16
TMEM53-208ENST00000476724 NEDD8-MDP1E9PL57 170 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 PGRP06401 933 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 GNAO1P09471 354 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 HIST1H2AGP0C0S8 130 aaPredicted RBP16.06■□□□□ 0.16
TMEM53-208ENST00000476724 MPC1LP0DKB6 136 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 HIST1H2ADP20671 130 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 HNMTP50135 292 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 SELPLGQ14242 412 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 PTGR1Q14914 329 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 C11orf91Q3C1V1 193 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 FAM174BQ3ZCQ3 159 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 GGTA1PQ4G0N0 100 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 AP1ARQ63HQ0 302 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 CYGBQ8WWM9 190 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 SMG7Q92540 1137 aaKnown RBP16.06■□□□□ 0.16
TMEM53-208ENST00000476724 VOPP1Q96AW1 172 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 HIST1H2AHQ96KK5 128 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 MAGEB10Q96LZ2 347 aaPredicted RBP16.06■□□□□ 0.16
TMEM53-208ENST00000476724 HIST1H2AJQ99878 128 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 H2AFJQ9BTM1 129 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 PARVBQ9HBI1 364 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 MRPS23Q9Y3D9 190 aaKnown RBP16.06■□□□□ 0.16
TMEM53-208ENST00000476724 WNT6Q9Y6F9 365 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 REV3LO60673 3130 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 NUP210Q8TEM1 1887 aaPredicted RBP16.06■□□□□ 0.16
TMEM53-208ENST00000476724 RFXAPO00287 272 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 KPNA5O15131 536 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 GSTA4O15217 222 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 SLC16A5O15375 505 aa16.06■□□□□ 0.16
TMEM53-208ENST00000476724 NUAK1O60285 661 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms