RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 TIGD4Q8IY51 512 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 PPFIBP2Q8ND30 876 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 IRGQQ8WZA9 623 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 NSMAFQ92636 917 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 INPP5KQ9BT40 448 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 LRRC1Q9BTT6 524 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 FN3KQ9H479 309 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 Q9H8V8 135 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 LMAN1LQ9HAT1 526 aa5.56□□□□□ -1.52
VPS50-212ENST00000476413 DDX43Q9NXZ2 648 aaKnown RBP5.56□□□□□ -1.52
VPS50-212ENST00000476413 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.56□□□□□ -1.52
VPS50-212ENST00000476413 A0A1W2PRB8 838 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 A0A1W2PS18 150 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 RNASEH1O60930 286 aaKnown RBP5.55□□□□□ -1.52
VPS50-212ENST00000476413 PLA2G4BP0C869 781 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 SAGP10523 405 aaPredicted RBP5.55□□□□□ -1.52
VPS50-212ENST00000476413 ATP5DP30049 168 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 B3GALT5-AS1P59052 145 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 PITX1P78337 314 aaPredicted RBP5.55□□□□□ -1.52
VPS50-212ENST00000476413 EEF1A2Q05639 463 aaKnown RBP5.55□□□□□ -1.52
VPS50-212ENST00000476413 GAGE5Q13069 117 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 GAGE6Q13070 117 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 NFE2L1Q14494 772 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 RRS1Q15050 365 aaKnown RBP5.55□□□□□ -1.52
VPS50-212ENST00000476413 UGCGQ16739 394 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 NHSL2Q5HYW2 709 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 SHEQ5VZ18 495 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 ZNF852Q6ZMS4 543 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 TMEM182Q6ZP80 229 aaPredicted RBP5.55□□□□□ -1.52
VPS50-212ENST00000476413 MSANTD1Q6ZTZ1 278 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 KCTD8Q6ZWB6 473 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 ANO5Q75V66 913 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 CFAP206Q8IYR0 622 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 SAMD14Q8IZD0 417 aaPredicted RBP5.55□□□□□ -1.52
VPS50-212ENST00000476413 THAP8Q8NA92 274 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 VANGL1Q8TAA9 524 aaPredicted RBP5.55□□□□□ -1.52
VPS50-212ENST00000476413 FIBINQ8TAL6 211 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 LMO3Q8TAP4 145 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 GRHL3Q8TE85 626 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 HEXDCQ8WVB3 486 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 SECTM1Q8WVN6 248 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 RAD54LQ92698 747 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 ST6GALNAC6Q969X2 333 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 IGSF21Q96ID5 467 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 PKP4Q99569 1192 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 EVA1AQ9H8M9 152 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 COPS7BQ9H9Q2 264 aaPredicted RBP5.55□□□□□ -1.52
VPS50-212ENST00000476413 TCF7L2Q9NQB0 619 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 OLFML3Q9NRN5 406 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 SLC38A7Q9NVC3 462 aa5.55□□□□□ -1.52
VPS50-212ENST00000476413 A0A0U1RQK1 487 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 PLSCR5A0PG75 271 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 ZNF320A2RRD8 509 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 HSPA8P11142 646 aaKnown RBP5.54□□□□□ -1.52
VPS50-212ENST00000476413 VDRP11473 427 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 DLK1P80370 383 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 COASYQ13057 564 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 SLMAPQ14BN4 828 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 NPTX1Q15818 432 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 UGT3A2Q3SY77 523 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 ELFN2Q5R3F8 820 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 SFMBT2Q5VUG0 894 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 SLC27A1Q6PCB7 646 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 CORO6Q6QEF8 472 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 SNX32Q86XE0 403 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 IQCA1Q86XH1 822 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 NAGSQ8N159 534 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 ZNF473Q8WTR7 871 aaKnown RBP5.54□□□□□ -1.52
VPS50-212ENST00000476413 MARK4Q96L34 752 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 WACQ9BTA9 647 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 SLC2A11Q9BYW1 496 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 HIPK2Q9H2X6 1198 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 C6orf106Q9H6K1 298 aaPredicted RBP5.54□□□□□ -1.52
VPS50-212ENST00000476413 A4GALTQ9NPC4 353 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 PTTG2Q9NZH5 202 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 DAPK2Q9UIK4 370 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 WDR83OSQ9Y284 106 aa5.54□□□□□ -1.52
VPS50-212ENST00000476413 IGLV5-45A0A087WSX0 123 aa5.53□□□□□ -1.52
VPS50-212ENST00000476413 CASTOR2A6NHX0 329 aa5.53□□□□□ -1.52
VPS50-212ENST00000476413 PSMA7O14818 248 aa5.53□□□□□ -1.52
VPS50-212ENST00000476413 SLC30A4O14863 429 aa5.53□□□□□ -1.52
VPS50-212ENST00000476413 IFIT3O14879 490 aaKnown RBP5.53□□□□□ -1.52
VPS50-212ENST00000476413 OAS2P29728 719 aaKnown RBP5.53□□□□□ -1.52
VPS50-212ENST00000476413 IL15P40933 162 aaPredicted RBP5.53□□□□□ -1.52
VPS50-212ENST00000476413 RPS18P62269 152 aaKnown RBP5.53□□□□□ -1.52
VPS50-212ENST00000476413 VEZF1Q14119 521 aa5.53□□□□□ -1.52
VPS50-212ENST00000476413 MCMDC2Q4G0Z9 681 aa5.53□□□□□ -1.52
VPS50-212ENST00000476413 ZNF324BQ6AW86 544 aaPredicted RBP5.53□□□□□ -1.52
VPS50-212ENST00000476413 SPATA21Q7Z572 469 aa5.53□□□□□ -1.52
VPS50-212ENST00000476413 ZDHHC17Q8IUH5 632 aa5.53□□□□□ -1.52
VPS50-212ENST00000476413 TMEM139Q8IV31 216 aa5.53□□□□□ -1.52
VPS50-212ENST00000476413 ZNF713Q8N859 430 aaPredicted RBP5.53□□□□□ -1.52
VPS50-212ENST00000476413 OR2T12Q8NG77 320 aa5.53□□□□□ -1.52
VPS50-212ENST00000476413 OR11H4Q8NGC9 324 aa5.53□□□□□ -1.52
VPS50-212ENST00000476413 EXOC4Q96A65 974 aa5.53□□□□□ -1.52
VPS50-212ENST00000476413 STAMBPL1Q96FJ0 436 aa5.53□□□□□ -1.52
VPS50-212ENST00000476413 GKN1Q9NS71 199 aa5.53□□□□□ -1.52
VPS50-212ENST00000476413 CDH7Q9ULB5 785 aa5.53□□□□□ -1.52
VPS50-212ENST00000476413 TMED3Q9Y3Q3 217 aa5.53□□□□□ -1.52
VPS50-212ENST00000476413 IGSF1Q8N6C5 1336 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms