RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 ESX1Q8N693 406 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 TXNDC5Q8NBS9 432 aaKnown RBP4.53□□□□□ -1.68
CCNL1-215ENST00000474539 SMG8Q8ND04 991 aaKnown RBP4.53□□□□□ -1.68
CCNL1-215ENST00000474539 PIWIL2Q8TC59 973 aaKnown RBP4.53□□□□□ -1.68
CCNL1-215ENST00000474539 GDPD5Q8WTR4 605 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 NCSTNQ92542 709 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 ART4Q93070 314 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 MYOCQ99972 504 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 ACTRT3Q9BYD9 372 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 METTL7AQ9H8H3 244 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 ACSS2Q9NR19 701 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 NLE1Q9NVX2 485 aaPredicted RBP4.53□□□□□ -1.68
CCNL1-215ENST00000474539 PLK2Q9NYY3 685 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 NINJ2Q9NZG7 142 aa4.53□□□□□ -1.68
CCNL1-215ENST00000474539 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 RIIAD1A6NNX1 92 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ARHGEF33A8MVX0 844 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 STX16-NPEPL1H3BU86 382 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 STX16O14662 325 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ADAMDEC1O15204 470 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CYP17A1P05093 508 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 PRKCGP05129 697 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 NR4A1P22736 598 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CD27P26842 260 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CRHR1P34998 444 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 GLRBP48167 497 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ZNF84P51523 738 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 C2orf80Q0P641 193 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 GTF2H2Q13888 395 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 PON2Q15165 354 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ALFQ53S48 1182 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 C2CD6Q53TS8 623 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 EARS2Q5JPH6 523 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 FGD3Q5JSP0 725 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 TMEM240Q5SV17 173 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 GTF2H2CQ6P1K8 395 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 FAM171BQ6P995 826 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ENPP6Q6UWR7 440 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 USP53Q70EK8 1073 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 DPPA4Q7L190 304 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 SSX8Q7RTT4 187 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ASPGQ86U10 573 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 NRROSQ86YC3 692 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 EPHX4Q8IUS5 362 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ARHGAP12Q8IWW6 846 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 SIX5Q8N196 739 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 METTL25Q8N6Q8 603 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ZDHHC1Q8WTX9 485 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 PHF10Q8WUB8 498 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 SLC5A11Q8WWX8 675 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 GATAD2BQ8WXI9 593 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 RAB39BQ96DA2 213 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 PHF21BQ96EK2 531 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 LOXL4Q96JB6 756 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 KREMEN1Q96MU8 473 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 PRMT1Q99873 361 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 TMEM120AQ9BXJ8 343 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 SERHL2Q9H4I8 314 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 TMEM9BQ9NQ34 198 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ZC4H2Q9NQZ6 224 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 FARSBQ9NSD9 589 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 PIH1D1Q9NWS0 290 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 C1orf109Q9NX04 203 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 GTF2A1LQ9UNN4 478 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 LIPT1Q9Y234 373 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 LINC01553A4QN01 128 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 OR6C74A6NCV1 312 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 TRIM38O00635 465 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ZBTB39O15060 712 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 FLRT2O43155 660 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 SNAP91O60641 907 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 PPM1BO75688 479 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 SLC22A3O75751 556 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 AHSA1O95433 338 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 NPPAP01160 153 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ANXA4P09525 319 aaPredicted RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CD247P20963 164 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 UGT1A4P22310 534 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 PROZP22891 400 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CXCR1P25024 350 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 RPL10P27635 214 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CD82P27701 267 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 UGT1A3P35503 534 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 EIF2S3P41091 472 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CDKN2BP42772 138 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 AGTR2P50052 363 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 OLR1P78380 273 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CHIT1Q13231 466 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 TRA2AQ13595 282 aaKnown RBP eCLIP4.52□□□□□ -1.697e-12■■□□□ 14.4
CCNL1-215ENST00000474539 MIIPQ5JXC2 388 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 PIK3R6Q5UE93 754 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 OR52E8Q6IFG1 317 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CXXC5Q7LFL8 322 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 IRF2BP2Q7Z5L9 587 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 KMT5CQ86Y97 462 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 TDRPQ86YL5 185 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ZDHHC13Q8IUH4 622 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 MRPL41Q8IXM3 137 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 TEX29Q8N6K0 151 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 SMYD1Q8NB12 490 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms