RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 C8GP07360 202 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 INHBAP08476 426 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 ITGA2BP08514 1039 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 CHRM5P08912 532 aaPredicted RBP12.03□□□□□ -0.48
DDX56-209ENST00000473924 TPBGLP0DKB5 382 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 ZNF37AP17032 561 aaPredicted RBP12.03□□□□□ -0.48
DDX56-209ENST00000473924 CYP2A7P20853 494 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 CDH3P22223 829 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 RBMS1P29558 406 aaKnown RBP12.03□□□□□ -0.48
DDX56-209ENST00000473924 PKLRP30613 574 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 MSH2P43246 934 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 LSSP48449 732 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 ARL4DP49703 201 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 ZNF460Q14592 562 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 CCSMST1Q4G0I0 132 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 CYHR1Q6ZMK1 362 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 RAPH1Q70E73 1250 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 ARHGAP22Q7Z5H3 698 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 FAM129CQ86XR2 697 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 CEP97Q8IW35 865 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 ADGRF3Q8IZF5 1079 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 LSMEM2Q8N112 164 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 OR9A1PQ8NGU1 263 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 IL17FQ96PD4 163 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 MAP3K3Q99759 626 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 FUT8Q9BYC5 575 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 POPDC3Q9HBV1 291 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 ACTR10Q9NZ32 417 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 PISDQ9UG56 409 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 NCOR2Q9Y618 2525 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 EXOC1LA0A1B0GW35 172 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 KRT87PA6NCN2 255 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 TLCD2A6NGC4 264 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 EFCAB7A8K855 629 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 GFYI3L273 518 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 PHGDHO43175 533 aaKnown RBP12.02□□□□□ -0.49
DDX56-209ENST00000473924 MAP3K7O43318 606 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 ABHD2P08910 425 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 HIST1H2AGP0C0S8 130 aaPredicted RBP12.02□□□□□ -0.49
DDX56-209ENST00000473924 ANKRD34CP0C6C1 535 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 HGFP14210 728 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 HIST1H2ADP20671 130 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 PRDX3P30048 256 aaKnown RBP12.02□□□□□ -0.49
DDX56-209ENST00000473924 KPNA2P52292 529 aaKnown RBP12.02□□□□□ -0.49
DDX56-209ENST00000473924 MAPK10P53779 464 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 RAB10P61026 200 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 VSNL1P62760 191 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 SP140Q13342 867 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 GRB7Q14451 532 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 RTP5Q14D33 572 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 ERCC6LQ2NKX8 1250 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.02□□□□□ -0.49
DDX56-209ENST00000473924 MROH9Q5TGP6 573 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 ANKS6Q68DC2 871 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 TAOK1Q7L7X3 1001 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 PRSS42Q7Z5A4 293 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 TAX1BP1Q86VP1 789 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 C2orf73Q8N5S3 287 aaPredicted RBP12.02□□□□□ -0.49
DDX56-209ENST00000473924 OR2L8Q8NGY9 312 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 MCOLN3Q8TDD5 553 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 UBLCP1Q8WVY7 318 aaPredicted RBP12.02□□□□□ -0.49
DDX56-209ENST00000473924 SLC22A18Q96BI1 424 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 HIST1H2AHQ96KK5 128 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 PAFAH2Q99487 392 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 HIST1H2AJQ99878 128 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 H2AFJQ9BTM1 129 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 MENTQ9BUN1 341 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 TRIM54Q9BYV2 358 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 ZNF768Q9H5H4 540 aaKnown RBP12.02□□□□□ -0.49
DDX56-209ENST00000473924 SPATA7Q9P0W8 599 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 POMT2Q9UKY4 750 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 PCDHGA8Q9Y5G5 932 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 KNTC1P50748 2209 aa12.02□□□□□ -0.49
DDX56-209ENST00000473924 IGHV5-51A0A0C4DH38 117 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 ZNF839A8K0R7 811 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 MYO1CO00159 1063 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 SLC16A5O15375 505 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 BRINP1O60477 761 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 TNFSF15O95150 251 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 TSPAN12O95859 305 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 CCL4P13236 92 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 UGT2B7P16662 529 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 ITIH1P19827 911 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 HSD17B2P37059 387 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 SERPINB9P50453 376 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 CYP4F3Q08477 520 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 TSTA3Q13630 321 aaPredicted RBP12.01□□□□□ -0.49
DDX56-209ENST00000473924 BMPR2Q13873 1038 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 SLC29A2Q14542 456 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 KIR2DS3Q14952 304 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 WDR93Q6P2C0 686 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 SPESP1Q6UW49 350 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 TMEM207Q6UWW9 146 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 UNQ6494/PRO21346Q6UXR6 183 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 CARFQ8N187 725 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 LMNTD1Q8N9Z9 388 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 LINC01555Q8NAE3 123 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 FBXO15Q8NCQ5 510 aaPredicted RBP12.01□□□□□ -0.49
DDX56-209ENST00000473924 SLC44A1Q8WWI5 657 aa12.01□□□□□ -0.49
DDX56-209ENST00000473924 GATA6Q92908 595 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms