RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 LRRC59Q96AG4 307 aaKnown RBP3.85□□□□□ -1.79
CD46-213ENST00000471987 FNDC11Q9BVV2 318 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 ITPAQ9BY32 194 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 PPIL3Q9H2H8 161 aaKnown RBP3.85□□□□□ -1.79
CD46-213ENST00000471987 HRH4Q9H3N8 390 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 OSER1Q9NX31 292 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 SPHK1Q9NYA1 384 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 OR6C2Q9NZP2 312 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 LARSQ9P2J5 1176 aaKnown RBP3.85□□□□□ -1.79
CD46-213ENST00000471987 ZHX1Q9UKY1 873 aaPredicted RBP3.85□□□□□ -1.79
CD46-213ENST00000471987 RARRES3Q9UL19 164 aa3.85□□□□□ -1.79
CD46-213ENST00000471987 A0A1W2PPR1 153 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 MPTX1A8MV57 137 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 HEPACAM2A8MVW5 462 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 XRCC3O43542 346 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 IGHV3-13P01766 116 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 VPREB1P12018 145 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 PRKACGP22612 351 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 MAN1A1P33908 653 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 SUOXP51687 545 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 MAZP56270 477 aaKnown RBP3.84□□□□□ -1.79
CD46-213ENST00000471987 SETQ01105 290 aaPredicted RBP3.84□□□□□ -1.79
CD46-213ENST00000471987 TMCO3Q6UWJ1 677 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 Q6ZR54 194 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 SMC5Q8IY18 1101 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 CFAP206Q8IYR0 622 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 Q8NBF4 154 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 OR5M8Q8NGP6 311 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 OR2AJ1Q8NGZ0 328 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 OR52N5Q8NH56 324 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 CCDC107Q8WV48 283 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 CENPTQ96BT3 561 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 ZNF414Q96IQ9 312 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 DPAGT1Q9H3H5 408 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 PPANQ9NQ55 473 aaKnown RBP3.84□□□□□ -1.79
CD46-213ENST00000471987 OLA1Q9NTK5 396 aaKnown RBP3.84□□□□□ -1.79
CD46-213ENST00000471987 TEX10Q9NXF1 929 aaPredicted RBP3.84□□□□□ -1.79
CD46-213ENST00000471987 P4HTMQ9NXG6 502 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 AASSQ9UDR5 926 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 HACL1Q9UJ83 578 aa3.84□□□□□ -1.79
CD46-213ENST00000471987 ZNF644Q9H582 1327 aaPredicted RBP3.84□□□□□ -1.79
CD46-213ENST00000471987 LNP1A1A4G5 178 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 WDPCPO95876 746 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 ARSEP51690 589 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 TMEM50BP56557 158 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 CDK3Q00526 305 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 PAX8Q06710 450 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 MOGAT2Q3SYC2 334 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 ALFQ53S48 1182 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 HAUS3Q68CZ6 603 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 SLC25A47Q6Q0C1 308 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 BTN2A1Q7KYR7 527 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 ADGRF2Q8IZF7 708 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 GPRC5AQ8NFJ5 357 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 MAPK15Q8TD08 544 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 PRICKLE1Q96MT3 831 aaPredicted RBP3.83□□□□□ -1.8
CD46-213ENST00000471987 NAP1L5Q96NT1 182 aaPredicted RBP3.83□□□□□ -1.8
CD46-213ENST00000471987 NEK1Q96PY6 1258 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 GAL3ST4Q96RP7 486 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 URM1Q9BTM9 101 aaKnown RBP3.83□□□□□ -1.8
CD46-213ENST00000471987 KCNK15Q9H427 330 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 NME7Q9Y5B8 376 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 ZNF318Q5VUA4 2279 aa3.83□□□□□ -1.8
CD46-213ENST00000471987 TPD52L2O43399 206 aaKnown RBP3.82□□□□□ -1.8
CD46-213ENST00000471987 AVILO75366 819 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 MED24O75448 989 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 CREG1O75629 220 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 VTNP04004 478 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 TM4SF1P30408 202 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 RPL21P46778 160 aaKnown RBP3.82□□□□□ -1.8
CD46-213ENST00000471987 TPD52P55327 224 aaPredicted RBP3.82□□□□□ -1.8
CD46-213ENST00000471987 SIRPAP78324 504 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 TMF1P82094 1093 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 MPP1Q00013 466 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 CXCL9Q07325 125 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 LY6DQ14210 128 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 KRT32Q14532 448 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 SQLEQ14534 574 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 JAKMIP3Q5VZ66 844 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 HAUS6Q7Z4H7 955 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 CDK20Q8IZL9 346 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 EID3Q8N140 333 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 ARHGAP24Q8N264 748 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 NUP37Q8NFH4 326 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 OR6S1Q8NH40 331 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 RPP25Q9BUL9 199 aaKnown RBP3.82□□□□□ -1.8
CD46-213ENST00000471987 FTOQ9C0B1 505 aaKnown RBP eCLIP3.82□□□□□ -1.8
CD46-213ENST00000471987 OR2B2Q9GZK3 357 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 SPATC1LQ9H0A9 340 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 KRT84Q9NSB2 600 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 MAN2C1Q9NTJ4 1040 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 TUBE1Q9UJT0 475 aa3.82□□□□□ -1.8
CD46-213ENST00000471987 IGLV3-10A0A075B6K4 115 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 A0A087X0M5 115 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 A0A1B0GX30 115 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 EPHB6O15197 1021 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 PRAMEF11O60813 436 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 GLRA3O75311 464 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 LIMK2P53671 638 aa3.81□□□□□ -1.8
CD46-213ENST00000471987 MFAP4P55083 255 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms