RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 CCSMST1Q4G0I0 132 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 PYCR3Q53H96 274 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 FAM219BQ5XKK7 198 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 TMEM198Q66K66 360 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 KIAA0895LQ68EN5 471 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 GCNT7Q6ZNI0 430 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 CHST15Q7LFX5 561 aaPredicted RBP9.13□□□□□ -0.95
VPS52-216ENST00000471309 DCUN1D3Q8IWE4 304 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 UBALD2Q8IYN6 164 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 DCBLD1Q8N8Z6 715 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 SNX31Q8N9S9 440 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 L3MBTL4Q8NA19 623 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 TMEM145Q8NBT3 493 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 OR56A3Q8NH54 315 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 MAFAQ8NHW3 353 aaPredicted RBP9.13□□□□□ -0.95
VPS52-216ENST00000471309 METTL6Q8TCB7 284 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 TUBGCP3Q96CW5 907 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 CMTM5Q96DZ9 223 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 WDR92Q96MX6 357 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 CATSPER2Q96P56 530 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 PKP4Q99569 1192 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 MYOCQ99972 504 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 AKTIPQ9H8T0 292 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 ACTR8Q9H981 624 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 FGF22Q9HCT0 170 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 TM7SF3Q9NS93 570 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 GPRC5BQ9NZH0 403 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 ZNHIT2Q9UHR6 403 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 CYP8B1Q9UNU6 501 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 DMTF1Q9Y222 760 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 SLC22A14Q9Y267 594 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 BTRCQ9Y297 605 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 PTGDR2Q9Y5Y4 395 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 COPG1Q9Y678 874 aaKnown RBP9.13□□□□□ -0.95
VPS52-216ENST00000471309 UNC80Q8N2C7 3258 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 LRP4O75096 1905 aa9.13□□□□□ -0.95
VPS52-216ENST00000471309 ATG2BQ96BY7 2078 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 KCNE1BA0A087WTH5 132 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 PRSS38A1L453 326 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 KRT87PA6NCN2 255 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 POM121BA6NF01 834 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 FAM170BA6NMN3 283 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 PRAMEF26H0Y7S4 382 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 IFRD1O00458 451 aaPredicted RBP9.12□□□□□ -0.95
VPS52-216ENST00000471309 TNFRSF10CO14798 259 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 ZNF217O75362 1048 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 APBB3O95704 486 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 FUCA1P04066 466 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 IGHV4-34P06331 123 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 LINC00032P0C843 101 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 ERGP11308 486 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 NQO1P15559 274 aaKnown RBP9.12□□□□□ -0.95
VPS52-216ENST00000471309 ITPKAP23677 461 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 HTR1BP28222 390 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 CD6P30203 668 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 MRPL19P49406 292 aaKnown RBP9.12□□□□□ -0.95
VPS52-216ENST00000471309 ACADVLP49748 655 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 HTR6P50406 440 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 CLDN2P57739 230 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 TBPL1P62380 186 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 ZNF33BQ06732 778 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 GRB7Q14451 532 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 TMEM31Q5JXX7 168 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 TCHHL1Q5QJ38 904 aaPredicted RBP9.12□□□□□ -0.95
VPS52-216ENST00000471309 CAPN13Q6MZZ7 669 aaPredicted RBP9.12□□□□□ -0.95
VPS52-216ENST00000471309 IL27RAQ6UWB1 636 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 THOC6Q86W42 341 aaKnown RBP9.12□□□□□ -0.95
VPS52-216ENST00000471309 GJD3Q8N144 294 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 SIX5Q8N196 739 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 PJA1Q8NG27 643 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 OR9A1PQ8NGU1 263 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 OR2T11Q8NH01 316 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 OR5K2Q8NHB8 316 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 RP9Q8TA86 221 aaKnown RBP9.12□□□□□ -0.95
VPS52-216ENST00000471309 ZNF480Q8WV37 535 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 TFGQ92734 400 aaPredicted RBP9.12□□□□□ -0.95
VPS52-216ENST00000471309 RAD51AP1Q96B01 352 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 CLDN23Q96B33 292 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 PYCR2Q96C36 320 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 TOE1Q96GM8 510 aaKnown RBP9.12□□□□□ -0.95
VPS52-216ENST00000471309 MARK4Q96L34 752 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 RAB3IPQ96QF0 476 aaPredicted RBP9.12□□□□□ -0.95
VPS52-216ENST00000471309 HHIPQ96QV1 700 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 OR2M4Q96R27 311 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 BTBD10Q9BSF8 475 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 FOXQ1Q9C009 403 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 ATG10Q9H0Y0 220 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 C1orf21Q9H246 121 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 CHRDQ9H2X0 955 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 C6orf106Q9H6K1 298 aaPredicted RBP9.12□□□□□ -0.95
VPS52-216ENST00000471309 TBC1D17Q9HA65 648 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 PRDM6Q9NQX0 595 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.12□□□□□ -0.95
VPS52-216ENST00000471309 C2orf42Q9NWW7 574 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 WSB2Q9NYS7 404 aaPredicted RBP9.12□□□□□ -0.95
VPS52-216ENST00000471309 SPATA7Q9P0W8 599 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 THEGQ9P2T0 379 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 SUFUQ9UMX1 484 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 ASF1AQ9Y294 204 aa9.12□□□□□ -0.95
VPS52-216ENST00000471309 MYO10Q9HD67 2058 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms