RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 GBP5Q96PP8 586 aa23.61■■□□□ 1.37
PTCH1-210ENST00000468211 DPH2Q9BQC3 489 aaPredicted RBP23.61■■□□□ 1.37
PTCH1-210ENST00000468211 AP1M1Q9BXS5 423 aa23.61■■□□□ 1.37
PTCH1-210ENST00000468211 CHRNA10Q9GZZ6 450 aa23.61■■□□□ 1.37
PTCH1-210ENST00000468211 RAB6BQ9NRW1 208 aa23.61■■□□□ 1.37
PTCH1-210ENST00000468211 DHCR7Q9UBM7 475 aaKnown RBP23.61■■□□□ 1.37
PTCH1-210ENST00000468211 KLHL20Q9Y2M5 609 aa23.61■■□□□ 1.37
PTCH1-210ENST00000468211 TCAF1Q9Y4C2 921 aa23.61■■□□□ 1.37
PTCH1-210ENST00000468211 SPTAN1Q13813 2472 aaKnown RBP23.6■■□□□ 1.37
PTCH1-210ENST00000468211 ISM1B1AKI9 464 aa23.6■■□□□ 1.37
PTCH1-210ENST00000468211 HBQ1P09105 142 aa23.6■■□□□ 1.37
PTCH1-210ENST00000468211 ZSCAN5DPP0CG00 497 aa23.6■■□□□ 1.37
PTCH1-210ENST00000468211 AGXTP21549 392 aa23.6■■□□□ 1.37
PTCH1-210ENST00000468211 MLIPQ5VWP3 458 aa23.6■■□□□ 1.37
PTCH1-210ENST00000468211 SLC22A15Q8IZD6 547 aa23.6■■□□□ 1.37
PTCH1-210ENST00000468211 DNAJC22Q8N4W6 341 aa23.6■■□□□ 1.37
PTCH1-210ENST00000468211 RNF10Q8N5U6 811 aaKnown RBP23.6■■□□□ 1.37
PTCH1-210ENST00000468211 ZNF655Q8N720 491 aaPredicted RBP23.6■■□□□ 1.37
PTCH1-210ENST00000468211 LINC01555Q8NAE3 123 aa23.6■■□□□ 1.37
PTCH1-210ENST00000468211 CPT1CQ8TCG5 803 aa23.6■■□□□ 1.37
PTCH1-210ENST00000468211 N4BP2L2Q92802 583 aaPredicted RBP23.6■■□□□ 1.37
PTCH1-210ENST00000468211 MENTQ9BUN1 341 aa23.6■■□□□ 1.37
PTCH1-210ENST00000468211 LUZP4Q9P127 313 aa23.6■■□□□ 1.37
PTCH1-210ENST00000468211 MARCH4Q9P2E8 410 aaPredicted RBP23.6■■□□□ 1.37
PTCH1-210ENST00000468211 C9J4A7 227 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 E7EVH7 732 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 CNOT3O75175 753 aaKnown RBP23.59■■□□□ 1.37
PTCH1-210ENST00000468211 GAS8O95995 478 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 GNLYP22749 145 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 PKLRP30613 574 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 OTX2P32243 289 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 PLOD1Q02809 727 aaPredicted RBP23.59■■□□□ 1.37
PTCH1-210ENST00000468211 HSPA14Q0VDF9 509 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 GRB7Q14451 532 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 SLC9A5Q14940 896 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 SIX1Q15475 284 aaPredicted RBP23.59■■□□□ 1.37
PTCH1-210ENST00000468211 SLC5A12Q1EHB4 618 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 PRR30Q53SZ7 412 aaPredicted RBP23.59■■□□□ 1.37
PTCH1-210ENST00000468211 RHBDD2Q6NTF9 364 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 KRT222Q8N1A0 295 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 C2orf73Q8N5S3 287 aaPredicted RBP23.59■■□□□ 1.37
PTCH1-210ENST00000468211 TMEM102Q8N9M5 508 aaPredicted RBP23.59■■□□□ 1.37
PTCH1-210ENST00000468211 MFRPQ9BY79 579 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 FRMD8P1Q9BZ68 369 aaPredicted RBP23.59■■□□□ 1.37
PTCH1-210ENST00000468211 GUCA1BQ9UMX6 200 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 ZNF451Q9Y4E5 1061 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 AP1M2Q9Y6Q5 423 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 NUP210LQ5VU65 1888 aa23.59■■□□□ 1.37
PTCH1-210ENST00000468211 GPC4O75487 556 aa23.58■■□□□ 1.37
PTCH1-210ENST00000468211 APRTP07741 180 aa23.58■■□□□ 1.37
PTCH1-210ENST00000468211 RAPSNQ13702 412 aa23.58■■□□□ 1.37
PTCH1-210ENST00000468211 ESPL1Q14674 2120 aa23.58■■□□□ 1.37
PTCH1-210ENST00000468211 KIR2DS3Q14952 304 aa23.58■■□□□ 1.37
PTCH1-210ENST00000468211 KCTD19Q17RG1 926 aaPredicted RBP23.58■■□□□ 1.37
PTCH1-210ENST00000468211 FASTKD1Q53R41 847 aaKnown RBP23.58■■□□□ 1.37
PTCH1-210ENST00000468211 MED25Q71SY5 747 aa23.58■■□□□ 1.37
PTCH1-210ENST00000468211 MRGPREQ86SM8 312 aa23.58■■□□□ 1.37
PTCH1-210ENST00000468211 RBMXL3Q8N7X1 1067 aaKnown RBP23.58■■□□□ 1.37
PTCH1-210ENST00000468211 Q8NA96 180 aa23.58■■□□□ 1.37
PTCH1-210ENST00000468211 SGSM3Q96HU1 749 aa23.58■■□□□ 1.37
PTCH1-210ENST00000468211 IL17FQ96PD4 163 aa23.58■■□□□ 1.37
PTCH1-210ENST00000468211 DHRS4Q9BTZ2 278 aa23.58■■□□□ 1.37
PTCH1-210ENST00000468211 CHRAC1Q9NRG0 131 aa23.58■■□□□ 1.37
PTCH1-210ENST00000468211 MAP4K5Q9Y4K4 846 aa23.58■■□□□ 1.37
PTCH1-210ENST00000468211 ICE1Q9Y2F5 2266 aa23.57■■□□□ 1.36
PTCH1-210ENST00000468211 MASP2O00187 686 aa23.57■■□□□ 1.36
PTCH1-210ENST00000468211 ZSCAN9O15535 394 aaPredicted RBP23.57■■□□□ 1.36
PTCH1-210ENST00000468211 MAGP20916 626 aa23.57■■□□□ 1.36
PTCH1-210ENST00000468211 CDC25BP30305 580 aa23.57■■□□□ 1.36
PTCH1-210ENST00000468211 RPL22P35268 128 aaKnown RBP23.57■■□□□ 1.36
PTCH1-210ENST00000468211 PRAMEP78395 509 aa23.57■■□□□ 1.36
PTCH1-210ENST00000468211 CRADDP78560 199 aa23.57■■□□□ 1.36
PTCH1-210ENST00000468211 KYNUQ16719 465 aa23.57■■□□□ 1.36
PTCH1-210ENST00000468211 DNAJC21Q5F1R6 531 aaKnown RBP23.57■■□□□ 1.36
PTCH1-210ENST00000468211 JMJD6Q6NYC1 403 aaPredicted RBP23.57■■□□□ 1.36
PTCH1-210ENST00000468211 RAB43Q86YS6 212 aa23.57■■□□□ 1.36
PTCH1-210ENST00000468211 CFAP61Q8NHU2 1237 aa23.57■■□□□ 1.36
PTCH1-210ENST00000468211 PSMG3-AS1Q96PY0 264 aa23.57■■□□□ 1.36
PTCH1-210ENST00000468211 TTC1Q99614 292 aa23.57■■□□□ 1.36
PTCH1-210ENST00000468211 CARD6Q9BX69 1037 aa23.57■■□□□ 1.36
PTCH1-210ENST00000468211 PADI2Q9Y2J8 665 aa23.57■■□□□ 1.36
PTCH1-210ENST00000468211 PTRH2Q9Y3E5 179 aaKnown RBP23.57■■□□□ 1.36
PTCH1-210ENST00000468211 PCDHGB7Q9Y5F8 929 aa23.57■■□□□ 1.36
PTCH1-210ENST00000468211 PCM1Q15154 2024 aa23.57■■□□□ 1.36
PTCH1-210ENST00000468211 SPTBN1Q01082 2364 aaKnown RBP23.56■■□□□ 1.36
PTCH1-210ENST00000468211 RAB28P51157 221 aa23.56■■□□□ 1.36
PTCH1-210ENST00000468211 TAX1BP1Q86VP1 789 aa23.56■■□□□ 1.36
PTCH1-210ENST00000468211 EFCAB3Q8N7B9 438 aa23.56■■□□□ 1.36
PTCH1-210ENST00000468211 GALNT11Q8NCW6 608 aa23.56■■□□□ 1.36
PTCH1-210ENST00000468211 SLC22A11Q9NSA0 550 aa23.56■■□□□ 1.36
PTCH1-210ENST00000468211 GPR83Q9NYM4 423 aa23.56■■□□□ 1.36
PTCH1-210ENST00000468211 PLCL2Q9UPR0 1127 aa23.56■■□□□ 1.36
PTCH1-210ENST00000468211 DOCK10Q96BY6 2186 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 NBPF19A0A087WUL8 3843 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 BLACEA4D250 179 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 VPS4BO75351 444 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 AOAHP28039 575 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 GCGRP47871 477 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 RRADP55042 308 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 DCDP81605 110 aaKnown RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms