RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 RGRP47804 291 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 CDKN1CP49918 316 aaPredicted RBP17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 ATN1P54259 1190 aaPredicted RBP17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 SERINC3Q13530 473 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 CAPRIN1Q14444 709 aaKnown RBP17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 PFKFB4Q16877 469 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 KIF19Q2TAC6 998 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 TBRG1Q3YBR2 411 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 ESCO2Q56NI9 601 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 MSANTD2Q6P1R3 559 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 SLC22A15Q8IZD6 547 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 PARP16Q8N5Y8 322 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 LRRC58Q96CX6 371 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 C6orf62Q9GZU0 229 aaPredicted RBP17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 DCSTAMPQ9H295 470 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 ALG2Q9H553 416 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 NTN4Q9HB63 628 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 METTL15A6NJ78 407 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 PDPK1O15530 556 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 TLR5O60602 858 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 KATNA1O75449 491 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 RPL17P18621 184 aaKnown RBP17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 PSMB9P28065 219 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 POLD2P49005 469 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 PRIM2P49643 509 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 GSK3BP49841 420 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 RPS24P62847 133 aaKnown RBP17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 SH3BP2P78314 561 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 FADDQ13158 208 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 ZNF235Q14590 738 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 ACAP2Q15057 778 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 PLEKHG6Q3KR16 790 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 TPRG1LQ5T0D9 272 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 PRSS55Q6UWB4 352 aaPredicted RBP17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 IFNEQ86WN2 208 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 ZDHHC13Q8IUH4 622 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 FBXL6Q8N531 539 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 MARVELD3Q96A59 401 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 RNF170Q96K19 258 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 ACAT2Q9BWD1 397 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 TRIM54Q9BYV2 358 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 TRIM8Q9BZR9 551 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 PNMA8BQ9ULN7 279 aaPredicted RBP17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 POLHQ9Y253 713 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 PCDHA9Q9Y5H5 950 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 KRT87PA6NCN2 255 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 HMX3A6NHT5 357 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 NCF1BA6NI72 391 aaPredicted RBP17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 NCF1CA8MVU1 366 aaPredicted RBP17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 EFCAB9A8MZ26 197 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 CD3EAPO15446 510 aaKnown RBP17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 CA12O43570 354 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 NOS1APO75052 506 aaPredicted RBP17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 VNN2O95498 520 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 NCF1P14598 390 aaPredicted RBP17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 SLC6A4P31645 630 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 YBX1P67809 324 aaKnown RBP17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 STARD3Q14849 445 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 OR4D1Q15615 310 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 RTP2Q5QGT7 225 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 MCOLN3Q8TDD5 553 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 ZNF566Q969W8 418 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 ESAMQ96AP7 390 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 BIRC7Q96CA5 298 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 NUAK2Q9H093 628 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 MFSD1Q9H3U5 465 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 POLR3BQ9NW08 1133 aaPredicted RBP17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 TAS2R9Q9NYW1 312 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 ABT1Q9ULW3 272 aaKnown RBP17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 BTBD3Q9Y2F9 522 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 IGLV3-10A0A075B6K4 115 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 A0A0X1KG70 313 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 LOC285095A0A1B0GVY8 99 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 FXYD1O00168 92 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 CAPN5O15484 640 aaPredicted RBP17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 SLC7A4O43246 635 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 PRSS23O95084 383 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 GLP2RO95838 553 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 RBP1P09455 135 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 NCK1P16333 377 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 SOX11P35716 441 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 UGT2B10P36537 528 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 NRG1Q02297 640 aaPredicted RBP17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 CLCA4Q14CN2 919 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 TRIP4Q15650 581 aaPredicted RBP17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 UNC50Q53HI1 259 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 ZNF678Q5SXM1 525 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 KCTD20Q7Z5Y7 419 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 PROSER1Q86XN7 944 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 TEX26Q8N6G2 289 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 PTGR2Q8N8N7 351 aaPredicted RBP17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 MRPL9Q9BYD2 267 aaKnown RBP17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 TSR3Q9UJK0 312 aaKnown RBP17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 MKLN1Q9UL63 735 aa17.67■□□□□ 0.42
SNAPC3-205ENST00000467062 A8MV72 311 aaPredicted RBP17.66■□□□□ 0.42
SNAPC3-205ENST00000467062 ADAM12O43184 909 aa17.66■□□□□ 0.42
SNAPC3-205ENST00000467062 IL7P13232 177 aa17.66■□□□□ 0.42
SNAPC3-205ENST00000467062 FMO4P31512 558 aa17.66■□□□□ 0.42
SNAPC3-205ENST00000467062 GGT5P36269 586 aa17.66■□□□□ 0.42
SNAPC3-205ENST00000467062 VPS26BQ4G0F5 336 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms