RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 UCK1Q9HA47 277 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 NUDT4Q9NZJ9 180 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 CPSF2Q9P2I0 782 aaKnown RBP10.83□□□□□ -0.68
VCP-204ENST00000466100 GRID1Q9ULK0 1009 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 RNF112Q9ULX5 631 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 ICKQ9UPZ9 632 aa10.83□□□□□ -0.68
VCP-204ENST00000466100 TMEM120BA0PK00 339 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 LILRA5A6NI73 299 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 SYCE1LA8MT33 242 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 G3V2L1 256 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 TM9SF1O15321 606 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 FLRT2O43155 660 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 GDF9O60383 454 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 SLC16A8O95907 504 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 VIPP01282 170 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 DHRS4L1P0CG22 281 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 MYF5P13349 255 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 IMPA1P29218 277 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 PKLRP30613 574 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 GRK6P43250 576 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 RPIAP49247 311 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 NFKB2Q00653 900 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 HHEXQ03014 270 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 PRKG2Q13237 762 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 CYP2A13Q16696 494 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 AASDHQ4L235 1098 aaPredicted RBP10.82□□□□□ -0.68
VCP-204ENST00000466100 TMEM26Q6ZUK4 368 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 TRIM48Q8IWZ4 208 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 KLHDC8AQ8IYD2 350 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 LRRC56Q8IYG6 542 aaPredicted RBP10.82□□□□□ -0.68
VCP-204ENST00000466100 EID2Q8N6I1 236 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 LINC01555Q8NAE3 123 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 MAGEC3Q8TD91 643 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 MCOLN3Q8TDD5 553 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 UBTD2Q8WUN7 234 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 RAD51AP1Q96B01 352 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 RHBDF1Q96CC6 855 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 FBXL8Q96CD0 374 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 SCYL1Q96KG9 808 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 TMEM79Q9BSE2 394 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 UTP6Q9NYH9 597 aaKnown RBP10.82□□□□□ -0.68
VCP-204ENST00000466100 SPATA7Q9P0W8 599 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 STOX2Q9P2F5 926 aaPredicted RBP10.82□□□□□ -0.68
VCP-204ENST00000466100 CIDEBQ9UHD4 219 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 POLG2Q9UHN1 485 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 PLAGL1Q9UM63 463 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 RNF215Q9Y6U7 377 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 COLEC10Q9Y6Z7 277 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 ADAMTS20P59510 1910 aa10.82□□□□□ -0.68
VCP-204ENST00000466100 C4orf47A7E2U8 309 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 A8MT66 165 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 SUPT3HB4E1H0 165 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 TAPBPO15533 448 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 NUDT21O43809 227 aaKnown RBP10.81□□□□□ -0.68
VCP-204ENST00000466100 DLX3O60479 287 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 CBFA2T3O75081 653 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 SUPT3HO75486 399 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 ZWINTO95229 277 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 CKMT1AP12532 417 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 GLB1P16278 677 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 MAP4P27816 1152 aaKnown RBP10.81□□□□□ -0.68
VCP-204ENST00000466100 GGT5P36269 586 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 SLC6A12P48065 614 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 RAB28P51157 221 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 WDR4P57081 412 aaKnown RBP10.81□□□□□ -0.68
VCP-204ENST00000466100 ARHGAP19Q14CB8 494 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 PCLAFQ15004 111 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 SUZ12Q15022 739 aaKnown RBP10.81□□□□□ -0.68
VCP-204ENST00000466100 NR0B2Q15466 257 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 INAVAQ3KP66 663 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 ZYG11AQ6WRX3 759 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 FRA10AC1Q70Z53 315 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 NAXDQ8IW45 347 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 ARMC2Q8NEN0 867 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 HMGCLL1Q8TB92 370 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 RDH11Q8TC12 318 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 ZNF480Q8WV37 535 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 JPH3Q8WXH2 748 aaPredicted RBP10.81□□□□□ -0.68
VCP-204ENST00000466100 EXT2Q93063 718 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 CCDC138Q96M89 665 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 IL17FQ96PD4 163 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 IQCGQ9H095 443 aaKnown RBP10.81□□□□□ -0.68
VCP-204ENST00000466100 ARL15Q9NXU5 204 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 FAM53CQ9NYF3 392 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 COPG2Q9UBF2 871 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 PTBP2Q9UKA9 531 aaKnown RBP10.81□□□□□ -0.68
VCP-204ENST00000466100 TDRKHQ9Y2W6 561 aaKnown RBP10.81□□□□□ -0.68
VCP-204ENST00000466100 ASB1Q9Y576 335 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 SPTBN4Q9H254 2564 aa10.81□□□□□ -0.68
VCP-204ENST00000466100 MDC1Q14676 2089 aaKnown RBP10.8□□□□□ -0.68
VCP-204ENST00000466100 A0A1W2PPV9 198 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 EME2A4GXA9 379 aaPredicted RBP10.8□□□□□ -0.68
VCP-204ENST00000466100 FAM221BA6H8Z2 402 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 NCF1BA6NI72 391 aaPredicted RBP10.8□□□□□ -0.68
VCP-204ENST00000466100 NCF1CA8MVU1 366 aaPredicted RBP10.8□□□□□ -0.68
VCP-204ENST00000466100 E7ENX8 843 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 GUCA1CO95843 209 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 ANXA5P08758 320 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 NCF1P14598 390 aaPredicted RBP10.8□□□□□ -0.68
VCP-204ENST00000466100 NR1D1P20393 614 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms