RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 GBP4Q96PP9 640 aa11.33□□□□□ -0.6
CNOT4-208ENST00000465721 SPSB2Q99619 263 aa11.33□□□□□ -0.6
CNOT4-208ENST00000465721 APOL2Q9BQE5 337 aa11.33□□□□□ -0.6
CNOT4-208ENST00000465721 TRIM56Q9BRZ2 755 aaKnown RBP11.33□□□□□ -0.6
CNOT4-208ENST00000465721 FAM96AQ9H5X1 160 aa11.33□□□□□ -0.6
CNOT4-208ENST00000465721 HYOU1Q9Y4L1 999 aa11.33□□□□□ -0.6
CNOT4-208ENST00000465721 HS3ST3B1Q9Y662 390 aa11.33□□□□□ -0.6
CNOT4-208ENST00000465721 SPG11Q96JI7 2443 aa11.33□□□□□ -0.6
CNOT4-208ENST00000465721 CCDC78A2IDD5 438 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 HEATR9A2RTY3 570 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 CCL22O00626 93 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 CDKN1CP49918 316 aaPredicted RBP11.32□□□□□ -0.6
CNOT4-208ENST00000465721 TDGF1P3P51864 188 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 GEMP55040 296 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 TFDP2Q14188 446 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 AGAP7PQ5VUJ5 663 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 COX15Q7KZN9 410 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 FJX1Q86VR8 437 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 HOOK3Q86VS8 718 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 RHOT2Q8IXI1 618 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 DNAJC22Q8N4W6 341 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 DNAJB14Q8TBM8 379 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 HEXDCQ8WVB3 486 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 CNDP1Q96KN2 507 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 AGAP4Q96P64 663 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 C19orf43Q9BQ61 176 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 NDC1Q9BTX1 674 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 WDR54Q9H977 334 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 VPS37BQ9H9H4 285 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 ZDHHC3Q9NYG2 299 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 CDC23Q9UJX2 597 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 TRHDEQ9UKU6 1024 aa11.32□□□□□ -0.6
CNOT4-208ENST00000465721 ZNF469Q96JG9 3925 aaPredicted RBP11.32□□□□□ -0.6
CNOT4-208ENST00000465721 hCG_1818297A0A087WSY0 165 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 A0A1B0GUH1 482 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 HACD1B0YJ81 288 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 ANXA9O76027 345 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 ONECUT2O95948 504 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 PRSS56P0CW18 603 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 TNNT1P13805 278 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 ACRV1P26436 265 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 SLC1A1P43005 524 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 UBASH3AP57075 661 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 OTUD4Q01804 1114 aaKnown RBP11.31□□□□□ -0.6
CNOT4-208ENST00000465721 Q0VFX4 171 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 TLR1Q15399 786 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 NKG7Q16617 165 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 SLC5A12Q1EHB4 618 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 ODF2Q5BJF6 829 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 ZNF324BQ6AW86 544 aaPredicted RBP11.31□□□□□ -0.6
CNOT4-208ENST00000465721 DENND5AQ6IQ26 1287 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 FAM180AQ6UWF9 173 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 KIRREL2Q6UWL6 708 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 SERPINA9Q86WD7 417 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 CLDN19Q8N6F1 224 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 P3H4Q92791 437 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 RELTQ969Z4 430 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 MESP1Q9BRJ9 268 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 LHPPQ9H008 270 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 SLC26A1Q9H2B4 701 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 EPS8L2Q9H6S3 715 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 OLAHQ9NV23 265 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 COPG2Q9UBF2 871 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 CTSFQ9UBX1 484 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 PLCL2Q9UPR0 1127 aa11.31□□□□□ -0.6
CNOT4-208ENST00000465721 KLF2Q9Y5W3 355 aaPredicted RBP11.31□□□□□ -0.6
CNOT4-208ENST00000465721 MAP1AP78559 2803 aaPredicted RBP11.31□□□□□ -0.6
CNOT4-208ENST00000465721 A0A1B0GX78 115 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 PCDH17O14917 1159 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 PSTPIP1O43586 416 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 CRTAMO95727 393 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 GSTM1P09488 218 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 COMTP21964 271 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 PSMB4P28070 264 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 ACADLP28330 430 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 RBL1P28749 1068 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 MC4RP32245 332 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 MARCKSL1P49006 195 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 KCNK10P57789 538 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 GSTM4Q03013 218 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 ART3Q13508 389 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 TUBB8Q3ZCM7 444 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 GPR33Q49SQ1 333 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 TFDP3Q5H9I0 405 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 FCRL6Q6DN72 434 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 RPUSD3Q6P087 351 aaKnown RBP11.3□□□□□ -0.6
CNOT4-208ENST00000465721 OVCH1Q7RTY7 1134 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 GDF7Q7Z4P5 450 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 LUZP1Q86V48 1076 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 FAM20CQ8IXL6 584 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 PARP9Q8IXQ6 854 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 PIANPQ8IYJ0 282 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 TBC1D21Q8IYX1 336 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 BCORP1Q8N888 145 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 OR11G2Q8NGC1 345 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.3□□□□□ -0.6
CNOT4-208ENST00000465721 ITLN2Q8WWU7 325 aaPredicted RBP11.3□□□□□ -0.6
CNOT4-208ENST00000465721 DLG3Q92796 817 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 DNAJC1Q96KC8 554 aaKnown RBP11.3□□□□□ -0.6
CNOT4-208ENST00000465721 DNAJC7Q99615 494 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms