RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 SYCE1LA8MT33 242 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 PRMT5O14744 637 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-215ENST00000465457 AQP9O43315 295 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 SMIM24O75264 130 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 IPO13O94829 963 aaKnown RBP13.54□□□□□ -0.24
HDAC6-215ENST00000465457 UBOX5O94941 541 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 PRAMEF1O95521 474 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 CSF2P04141 144 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 ALPIP09923 528 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 ITIH1P19827 911 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 AKT2P31751 481 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 GLRBP48167 497 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 HNRNPKP61978 463 aaKnown RBP eCLIP13.54□□□□□ -0.24
HDAC6-215ENST00000465457 FOXK1P85037 733 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 GALNT1Q10472 559 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-215ENST00000465457 DLG1Q12959 904 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 NFATC2Q13469 925 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 SPIDRQ14159 915 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 ZNF460Q14592 562 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 NR0B2Q15466 257 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 TMEM259Q4ZIN3 620 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 CFAP157Q5JU67 520 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 FAM46CQ5VWP2 391 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 TAS2R42Q7RTR8 314 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 LDB1Q86U70 411 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-215ENST00000465457 LMX1AQ8TE12 382 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 CNDP1Q96KN2 507 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 GATA5Q9BWX5 397 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-215ENST00000465457 CLPBQ9H078 707 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 SLC25A18Q9H1K4 315 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 KCNK13Q9HB14 408 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 EML4Q9HC35 981 aaKnown RBP13.54□□□□□ -0.24
HDAC6-215ENST00000465457 MRGBPQ9NV56 204 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 NFKBIL1Q9UBC1 381 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-215ENST00000465457 VTI1BQ9UEU0 232 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 TRMT6Q9UJA5 497 aaKnown RBP13.54□□□□□ -0.24
HDAC6-215ENST00000465457 GNPTGQ9UJJ9 305 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 DNAJC16Q9Y2G8 782 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 SPTY2D1-AS1A0A0U1RR47 76 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 C1QTNF3-AMACRE9PGA6 284 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 MYO1CO00159 1063 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 KPNA3O00505 521 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-215ENST00000465457 DLX3O60479 287 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 UGT2B4P06133 528 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 CELA2BP08218 269 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-215ENST00000465457 SBK3P0C264 359 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 TPBGLP0DKB5 382 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 LIPCP11150 499 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 CD1DP15813 335 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 TFEBP19484 476 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 MLLT3P42568 568 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-215ENST00000465457 AQP5P55064 265 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 DCDC1P59894 354 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 SF3A3Q12874 501 aaKnown RBP eCLIP13.53□□□□□ -0.245e-8■■■□□ 16.9
HDAC6-215ENST00000465457 EIF2B5Q13144 721 aaKnown RBP13.53□□□□□ -0.24
HDAC6-215ENST00000465457 C1orf61Q13536 156 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 ARHGEF7Q14155 803 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 CES4AQ5XG92 561 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 CLNKQ7Z7G1 428 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 DSG4Q86SJ6 1040 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 PARGQ86W56 976 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 ZFAND4Q86XD8 727 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 STAG3L4Q8TBR4 150 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 THOC1Q96FV9 657 aaKnown RBP13.53□□□□□ -0.24
HDAC6-215ENST00000465457 LIN37Q96GY3 246 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-215ENST00000465457 FAR2Q96K12 515 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 BIRC8Q96P09 236 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 SORT1Q99523 831 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 BOCQ9BWV1 1114 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 MYLK2Q9H1R3 596 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 P2RY12Q9H244 342 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 EVA1BQ9NVM1 165 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 PKD2L2Q9NZM6 624 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 FOXJ2Q9P0K8 574 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 HEY2Q9UBP5 337 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 PISDQ9UG56 409 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 IL36AQ9UHA7 158 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 CRLS1Q9UJA2 301 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 PCDHGA7Q9Y5G6 932 aa13.53□□□□□ -0.24
HDAC6-215ENST00000465457 CENPEQ02224 2701 aa13.52□□□□□ -0.24
HDAC6-215ENST00000465457 PRAMEF33A0A0G2JMD5 474 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 NPIPB15A6NHN6 443 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-215ENST00000465457 AGAP14A8MT82 685 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 E5RI56 91 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 H0YHG0 523 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 NTN3O00634 580 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-215ENST00000465457 ITM2AO43736 263 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 PRAMEF10O60809 474 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 UNC5CO95185 931 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 PCDH8O95206 1070 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 CLDN7O95471 211 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 PRNPP04156 253 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 BPIP17213 487 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 JUNDP17535 347 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 FMO4P31512 558 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 VIPR1P32241 457 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 ETV5P41161 510 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 IL2P60568 153 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 KRT72Q14CN4 511 aa13.52□□□□□ -0.25
HDAC6-215ENST00000465457 TCEA2Q15560 299 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms