RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 LUC7L2Q9Y383 392 aaKnown RBP9.03□□□□□ -0.96
APP-213ENST00000464867 HS3ST3B1Q9Y662 390 aa9.03□□□□□ -0.96
APP-213ENST00000464867 COLEC10Q9Y6Z7 277 aa9.03□□□□□ -0.96
APP-213ENST00000464867 FAM237BA0A1B0GVD1 139 aa9.02□□□□□ -0.97
APP-213ENST00000464867 NKX2-6A6NCS4 301 aa9.02□□□□□ -0.97
APP-213ENST00000464867 FAM90A27PA6NNH2 459 aa9.02□□□□□ -0.97
APP-213ENST00000464867 FZD6O60353 706 aa9.02□□□□□ -0.97
APP-213ENST00000464867 CNOT3O75175 753 aaKnown RBP9.02□□□□□ -0.97
APP-213ENST00000464867 CTAG2O75638 210 aa9.02□□□□□ -0.97
APP-213ENST00000464867 ZNF202O95125 648 aa9.02□□□□□ -0.97
APP-213ENST00000464867 FGFR1OPO95684 399 aaKnown RBP9.02□□□□□ -0.97
APP-213ENST00000464867 HPP00738 406 aa9.02□□□□□ -0.97
APP-213ENST00000464867 F10P00742 488 aa9.02□□□□□ -0.97
APP-213ENST00000464867 ST6GAL1P15907 406 aa9.02□□□□□ -0.97
APP-213ENST00000464867 ERCC2P18074 760 aa9.02□□□□□ -0.97
APP-213ENST00000464867 CHRNB4P30926 498 aa9.02□□□□□ -0.97
APP-213ENST00000464867 RPL26P61254 145 aaKnown RBP9.02□□□□□ -0.97
APP-213ENST00000464867 ALDH6A1Q02252 535 aaKnown RBP9.02□□□□□ -0.97
APP-213ENST00000464867 PNOCQ13519 176 aa9.02□□□□□ -0.97
APP-213ENST00000464867 C8orf34Q49A92 452 aa9.02□□□□□ -0.97
APP-213ENST00000464867 ALS2CLQ60I27 953 aa9.02□□□□□ -0.97
APP-213ENST00000464867 TMEM211Q6ICI0 200 aa9.02□□□□□ -0.97
APP-213ENST00000464867 KLHL10Q6JEL2 608 aa9.02□□□□□ -0.97
APP-213ENST00000464867 TLDC1Q6P9B6 456 aa9.02□□□□□ -0.97
APP-213ENST00000464867 NAPRTQ6XQN6 538 aa9.02□□□□□ -0.97
APP-213ENST00000464867 ARHGAP12Q8IWW6 846 aa9.02□□□□□ -0.97
APP-213ENST00000464867 TRAM1L1Q8N609 369 aa9.02□□□□□ -0.97
APP-213ENST00000464867 OR11G2Q8NGC1 345 aa9.02□□□□□ -0.97
APP-213ENST00000464867 OR4E2Q8NGC2 313 aa9.02□□□□□ -0.97
APP-213ENST00000464867 LILRB4Q8NHJ6 448 aa9.02□□□□□ -0.97
APP-213ENST00000464867 GDAP1Q8TB36 358 aa9.02□□□□□ -0.97
APP-213ENST00000464867 DENND1AQ8TEH3 1009 aa9.02□□□□□ -0.97
APP-213ENST00000464867 FKBP10Q96AY3 582 aa9.02□□□□□ -0.97
APP-213ENST00000464867 DHX35Q9H5Z1 703 aaKnown RBP9.02□□□□□ -0.97
APP-213ENST00000464867 ZNF160Q9HCG1 818 aa9.02□□□□□ -0.97
APP-213ENST00000464867 DHCR7Q9UBM7 475 aaKnown RBP9.02□□□□□ -0.97
APP-213ENST00000464867 NXT1Q9UKK6 140 aaKnown RBP9.02□□□□□ -0.97
APP-213ENST00000464867 RPL26L1Q9UNX3 145 aaKnown RBP9.02□□□□□ -0.97
APP-213ENST00000464867 CFAP20Q9Y6A4 193 aaKnown RBP9.02□□□□□ -0.97
APP-213ENST00000464867 FAM237AA0A1B0GTK4 181 aa9.01□□□□□ -0.97
APP-213ENST00000464867 NPIPA5E9PKD4 350 aa9.01□□□□□ -0.97
APP-213ENST00000464867 MAP2K7O14733 419 aa9.01□□□□□ -0.97
APP-213ENST00000464867 ZSCAN9O15535 394 aaPredicted RBP9.01□□□□□ -0.97
APP-213ENST00000464867 TTI1O43156 1089 aa9.01□□□□□ -0.97
APP-213ENST00000464867 MTX2O75431 263 aa9.01□□□□□ -0.97
APP-213ENST00000464867 PNMA6AP0CW24 399 aaPredicted RBP9.01□□□□□ -0.97
APP-213ENST00000464867 MMP8P22894 467 aa9.01□□□□□ -0.97
APP-213ENST00000464867 CES1P23141 567 aa9.01□□□□□ -0.97
APP-213ENST00000464867 NDUFS1P28331 727 aa9.01□□□□□ -0.97
APP-213ENST00000464867 PRDX3P30048 256 aaKnown RBP9.01□□□□□ -0.97
APP-213ENST00000464867 CDH6P55285 790 aa9.01□□□□□ -0.97
APP-213ENST00000464867 NOMO3P69849 1222 aa9.01□□□□□ -0.97
APP-213ENST00000464867 APBA1Q02410 837 aa9.01□□□□□ -0.97
APP-213ENST00000464867 KEAP1Q14145 624 aa9.01□□□□□ -0.97
APP-213ENST00000464867 SLC5A12Q1EHB4 618 aa9.01□□□□□ -0.97
APP-213ENST00000464867 DEFB113Q30KQ7 82 aa9.01□□□□□ -0.97
APP-213ENST00000464867 VWA3BQ502W6 1294 aa9.01□□□□□ -0.97
APP-213ENST00000464867 WDR59Q6PJI9 974 aa9.01□□□□□ -0.97
APP-213ENST00000464867 C3P1Q6ZMU1 363 aa9.01□□□□□ -0.97
APP-213ENST00000464867 CDHR3Q6ZTQ4 885 aa9.01□□□□□ -0.97
APP-213ENST00000464867 CEP128Q6ZU80 1094 aa9.01□□□□□ -0.97
APP-213ENST00000464867 RFX8Q6ZV50 586 aa9.01□□□□□ -0.97
APP-213ENST00000464867 OVCH1Q7RTY7 1134 aa9.01□□□□□ -0.97
APP-213ENST00000464867 DOLPP1Q86YN1 238 aa9.01□□□□□ -0.97
APP-213ENST00000464867 ARMC10Q8N2F6 343 aa9.01□□□□□ -0.97
APP-213ENST00000464867 GHDCQ8N2G8 530 aa9.01□□□□□ -0.97
APP-213ENST00000464867 ZNF655Q8N720 491 aaPredicted RBP9.01□□□□□ -0.97
APP-213ENST00000464867 SIMC1Q8NDZ2 872 aa9.01□□□□□ -0.97
APP-213ENST00000464867 LPCAT1Q8NF37 534 aa9.01□□□□□ -0.97
APP-213ENST00000464867 BRSK1Q8TDC3 778 aa9.01□□□□□ -0.97
APP-213ENST00000464867 BRIX1Q8TDN6 353 aaKnown RBP9.01□□□□□ -0.97
APP-213ENST00000464867 DLG3Q92796 817 aa9.01□□□□□ -0.97
APP-213ENST00000464867 SMARCE1Q969G3 411 aa9.01□□□□□ -0.97
APP-213ENST00000464867 C12orf66Q96MD2 445 aa9.01□□□□□ -0.97
APP-213ENST00000464867 LYSMD1Q96S90 227 aa9.01□□□□□ -0.97
APP-213ENST00000464867 DMRTA2Q96SC8 542 aa9.01□□□□□ -0.97
APP-213ENST00000464867 C11orf70Q9BRQ4 267 aa9.01□□□□□ -0.97
APP-213ENST00000464867 NUP85Q9BW27 656 aa9.01□□□□□ -0.97
APP-213ENST00000464867 POLR1EQ9GZS1 481 aaKnown RBP9.01□□□□□ -0.97
APP-213ENST00000464867 SPRTNQ9H040 489 aaPredicted RBP9.01□□□□□ -0.97
APP-213ENST00000464867 RNF32Q9H0A6 362 aa9.01□□□□□ -0.97
APP-213ENST00000464867 SRMSQ9H3Y6 488 aa9.01□□□□□ -0.97
APP-213ENST00000464867 KIR3DX1Q9H7L2 352 aa9.01□□□□□ -0.97
APP-213ENST00000464867 NT5MQ9NPB1 228 aa9.01□□□□□ -0.97
APP-213ENST00000464867 IL17CQ9P0M4 197 aa9.01□□□□□ -0.97
APP-213ENST00000464867 NPIPA1Q9UND3 350 aa9.01□□□□□ -0.97
APP-213ENST00000464867 AP4E1Q9UPM8 1137 aa9.01□□□□□ -0.97
APP-213ENST00000464867 CHKBQ9Y259 395 aa9.01□□□□□ -0.97
APP-213ENST00000464867 GTPBP10A4D1E9 387 aaKnown RBP9□□□□□ -0.97
APP-213ENST00000464867 OR5H15A6NDH6 313 aa9□□□□□ -0.97
APP-213ENST00000464867 CCP110O43303 1012 aa9□□□□□ -0.97
APP-213ENST00000464867 POP7O75817 140 aaKnown RBP9□□□□□ -0.97
APP-213ENST00000464867 TOXO94900 526 aa9□□□□□ -0.97
APP-213ENST00000464867 WDPCPO95876 746 aa9□□□□□ -0.97
APP-213ENST00000464867 F13A1P00488 732 aa9□□□□□ -0.97
APP-213ENST00000464867 RAF1P04049 648 aa9□□□□□ -0.97
APP-213ENST00000464867 RPLP1P05386 114 aaKnown RBP9□□□□□ -0.97
APP-213ENST00000464867 ZSCAN22P10073 491 aaPredicted RBP9□□□□□ -0.97
APP-213ENST00000464867 PON1P27169 355 aa9□□□□□ -0.97
APP-213ENST00000464867 HOXC12P31275 282 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms