RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 ABHD18Q0P651 414 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 SERINC3Q13530 473 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 GTF2H2Q13888 395 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 SIM2Q14190 667 aaPredicted RBP7.14□□□□□ -1.27
USP48-206ENST00000464577 ZNF235Q14590 738 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 ABRAXAS2Q15018 415 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 TAF1AQ15573 450 aaPredicted RBP7.14□□□□□ -1.27
USP48-206ENST00000464577 TBCEQ15813 527 aaPredicted RBP7.14□□□□□ -1.27
USP48-206ENST00000464577 ALFQ53S48 1182 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 CARD16Q5EG05 197 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 MS4A13Q5J8X5 152 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 CACHD1Q5VU97 1274 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 KIAA1614Q5VZ46 1190 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 DESI1Q6ICB0 168 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 OR2T5Q6IEZ7 315 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 GTF2H2CQ6P1K8 395 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 GALNT5Q7Z7M9 940 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 ZDHHC21Q8IVQ6 265 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 PGBD3Q8N328 593 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 TTC29Q8NA56 475 aaPredicted RBP7.14□□□□□ -1.27
USP48-206ENST00000464577 SIDT2Q8NBJ9 832 aaKnown RBP7.14□□□□□ -1.27
USP48-206ENST00000464577 OR2T29Q8NH02 315 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 NETO1Q8TDF5 533 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 TP53INP1Q96A56 240 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 PYCR2Q96C36 320 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 FAM120BQ96EK7 910 aaKnown RBP7.14□□□□□ -1.27
USP48-206ENST00000464577 CDK15Q96Q40 435 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 SNX18Q96RF0 628 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 GAD1Q99259 594 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 NACA2Q9H009 215 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 KCNH6Q9H252 994 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 NMUR1Q9HB89 426 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 CCDC177Q9NQR7 707 aaPredicted RBP7.14□□□□□ -1.27
USP48-206ENST00000464577 RAPGEFL1Q9UHV5 662 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 MRPL42Q9Y6G3 142 aaKnown RBP7.14□□□□□ -1.27
USP48-206ENST00000464577 PTPRDP23468 1912 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 NLRC5Q86WI3 1866 aa7.14□□□□□ -1.27
USP48-206ENST00000464577 A0A1W2PQH9 124 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 DRGXA6NNA5 263 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 TBKBP1A7MCY6 615 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 PER2O15055 1255 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 IDH3BO43837 385 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 DPM1O60762 260 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 CCNDBP1O95273 360 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 KRT75O95678 551 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 S100BP04271 92 aaPredicted RBP7.13□□□□□ -1.27
USP48-206ENST00000464577 SEMG1P04279 462 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 KRT8P05787 483 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 LCKP06239 509 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 HOXB9P17482 250 aaPredicted RBP7.13□□□□□ -1.27
USP48-206ENST00000464577 HOXA9P31269 272 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 CTSKP43235 329 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 MAPKAPK2P49137 400 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 TTPAP49638 278 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 PGFP49763 221 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 TBX4P57082 545 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 PLIN5Q00G26 463 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 PPP1R8Q12972 351 aaKnown RBP7.13□□□□□ -1.27
USP48-206ENST00000464577 MFSD10Q14728 455 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 UPP1Q16831 310 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 AAK1Q2M2I8 961 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 TTLL9Q3SXZ7 439 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 SPANXN4Q5MJ08 99 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 CTSL3PQ5NE16 218 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 TPRG1LQ5T0D9 272 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 AGAP6Q5VW22 663 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 MLIPQ5VWP3 458 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 RSBN1Q5VWQ0 802 aaPredicted RBP7.13□□□□□ -1.27
USP48-206ENST00000464577 GCNT7Q6ZNI0 430 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 CEP68Q76N32 757 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 SLC46A3Q7Z3Q1 461 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 ADAMTSL2Q86TH1 951 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 HEATR4Q86WZ0 1026 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 METTL4Q8N3J2 472 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 TMEM132CQ8N3T6 1108 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 DCBLD1Q8N8Z6 715 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 NUDT8Q8WV74 236 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 EEF1AKMT1Q8WVE0 214 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 ESAMQ96AP7 390 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 CCDC97Q96F63 343 aaPredicted RBP7.13□□□□□ -1.27
USP48-206ENST00000464577 AGAP4Q96P64 663 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 EMILIN2Q9BXX0 1053 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 NDEL1Q9GZM8 345 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 IL1RAPQ9NPH3 570 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 MKLN1Q9UL63 735 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 RNF6Q9Y252 685 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 PEX16Q9Y5Y5 336 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 U3KQV3 271 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 PNMA8CA0A1B0GUJ8 204 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 EVPLLA8MZ36 301 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 LOC110117498-PIK3R3F6TDL0 507 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 M0QZQ0 153 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 NIPSNAP2O75323 286 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 WBP4O75554 376 aaKnown RBP7.13□□□□□ -1.27
USP48-206ENST00000464577 ARHGEF15O94989 841 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 MED26O95402 600 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 GLUD1P00367 558 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 APOA1P02647 267 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 ESR1P03372 595 aa7.13□□□□□ -1.27
USP48-206ENST00000464577 CNPP09543 421 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms