RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 TCEAL6Q6IPX3 200 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 FRA10AC1Q70Z53 315 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 SLC22A9Q8IVM8 553 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 FBXO39Q8N4B4 442 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 OR2I1PQ8NGU4 316 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 UBTD2Q8WUN7 234 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 ZNF480Q8WV37 535 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 CKAP2Q8WWK9 683 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 TCEAL3Q969E4 200 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 PHF21BQ96EK2 531 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 L3HYPDHQ96EM0 354 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 HIST1H2AHQ96KK5 128 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 NRTNQ99748 197 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 HIST1H2AJQ99878 128 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 TMEM79Q9BSE2 394 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 H2AFJQ9BTM1 129 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 KIR3DX1Q9H7L2 352 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 ARL15Q9NXU5 204 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 NCKIPSDQ9NZQ3 722 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 STOX2Q9P2F5 926 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-202ENST00000463060 CPNE7Q9UBL6 633 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 COLEC10Q9Y6Z7 277 aa13.94□□□□□ -0.18
COL6A1-202ENST00000463060 LNP1A1A4G5 178 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 LRRC14BA6NHZ5 514 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 NCF1BA6NI72 391 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-202ENST00000463060 NCF1CA8MVU1 366 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-202ENST00000463060 NCF1P14598 390 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-202ENST00000463060 TGM1P22735 817 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 MAP4P27816 1152 aaKnown RBP13.93□□□□□ -0.18
COL6A1-202ENST00000463060 MDH1P40925 334 aaKnown RBP13.93□□□□□ -0.18
COL6A1-202ENST00000463060 AGTR2P50052 363 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 GYS2P54840 703 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 IL9RQ01113 521 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 ARHGAP19Q14CB8 494 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 PDK4Q16654 411 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 CYP2A13Q16696 494 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 UNC50Q53HI1 259 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 ZNF678Q5SXM1 525 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 C6orf132Q5T0Z8 1188 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 LIPMQ5VYY2 423 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 METTL2BQ6P1Q9 378 aaKnown RBP13.93□□□□□ -0.18
COL6A1-202ENST00000463060 TTC23LQ6PF05 361 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 ATG14Q6ZNE5 492 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 MTERF4Q7Z6M4 381 aaKnown RBP13.93□□□□□ -0.18
COL6A1-202ENST00000463060 NUDCD3Q8IVD9 361 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 TCAIMQ8N3R3 496 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 ARL14Q8N4G2 192 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 PTGR2Q8N8N7 351 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-202ENST00000463060 CCDC63Q8NA47 563 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 OR56A3Q8NH54 315 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 HMGCLL1Q8TB92 370 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 ATOH1Q92858 354 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-202ENST00000463060 EXT2Q93063 718 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 MOCOSQ96EN8 888 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 GATA5Q9BWX5 397 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-202ENST00000463060 POT1Q9NUX5 634 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 DNAAF2Q9NVR5 837 aaKnown RBP13.93□□□□□ -0.18
COL6A1-202ENST00000463060 NLGN3Q9NZ94 848 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 ASB1Q9Y576 335 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 WDR87Q6ZQQ6 2873 aa13.93□□□□□ -0.18
COL6A1-202ENST00000463060 WDR91A4D1P6 747 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 B4DGG1 531 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 E7ENX8 843 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 PROB1E7EW31 1015 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 TRIM38O00635 465 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 KLF11O14901 512 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 PPM1DO15297 605 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 SIX3O95343 332 aaPredicted RBP13.92□□□□□ -0.18
COL6A1-202ENST00000463060 GFAPP14136 432 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 ARRB2P32121 409 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 CCT8P50990 548 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 NAGLUP54802 743 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 HERVK_113P63132 956 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 TAP2Q03519 686 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 FBXO48Q5FWF7 155 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 AGTRAPQ6RW13 159 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 RGS9BPQ6ZS82 235 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 GATAD2AQ86YP4 633 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 RBM12BQ8IXT5 1001 aaKnown RBP13.92□□□□□ -0.18
COL6A1-202ENST00000463060 MINDY1Q8N5J2 469 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 OR52E1Q8NGJ3 308 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 OR4C6Q8NH72 309 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 RAB3IL1Q8TBN0 382 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 ATL1Q8WXF7 558 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 ZNF75CPQ92670 426 aaPredicted RBP13.92□□□□□ -0.18
COL6A1-202ENST00000463060 ESAMQ96AP7 390 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 CXorf40BQ96DE9 158 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 TMEM237Q96Q45 408 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 PAIP2Q9BPZ3 127 aaKnown RBP13.92□□□□□ -0.18
COL6A1-202ENST00000463060 HGH1Q9BTY7 390 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 SGPP1Q9BX95 441 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 ERVK-6Q9BXR3 956 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 CD244Q9BZW8 370 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 GSTO2Q9H4Y5 243 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 CCDC134Q9H6E4 229 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 UCK1Q9HA47 277 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 FAM86C1Q9NVL1 165 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 SPATA7Q9P0W8 599 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 CIDEBQ9UHD4 219 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 DOLKQ9UPQ8 538 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms