RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 ISLR2Q6UXK2 745 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 GFRALQ6UXV0 394 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 ZNF571Q7Z3V5 609 aaPredicted RBP7.41□□□□□ -1.22
SMC3-202ENST00000462899 DAAM2Q86T65 1068 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 GPR135Q8IZ08 494 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 OR11G2Q8NGC1 345 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 OR52E1Q8NGJ3 308 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 ADAMTS18Q8TE60 1221 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 NAT14Q8WUY8 206 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 MTFMTQ96DP5 389 aaKnown RBP7.41□□□□□ -1.22
SMC3-202ENST00000462899 BTBD6Q96KE9 485 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 SLC25A51Q9H1U9 297 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 OR52A5Q9H2C5 316 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 CXXC4Q9H2H0 198 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 CLSTN2Q9H4D0 955 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 UGT1A7Q9HAW7 530 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 UGT1A10Q9HAW8 530 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 UGT1A8Q9HAW9 530 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 ACTR10Q9NZ32 417 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 GPN3Q9UHW5 284 aaPredicted RBP7.41□□□□□ -1.22
SMC3-202ENST00000462899 MYO6Q9UM54 1294 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 ZNF835Q9Y2P0 537 aa7.41□□□□□ -1.22
SMC3-202ENST00000462899 FBN1P35555 2871 aaKnown RBP7.41□□□□□ -1.22
SMC3-202ENST00000462899 CSPG4Q6UVK1 2322 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 CUBNO60494 3623 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 LOC285095A0A1B0GVY8 99 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 LRRC10BA6NIK2 292 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 VSTM2BA6NLU5 285 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 AGAP14A8MT82 685 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 C2orf74A8MZ97 194 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 UNC5CO95185 931 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 CLDN14O95500 239 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 ALBP02768 609 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 THBS1P07996 1170 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 SLC35G4P0C7Q5 338 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 MYBL1P10243 752 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 PYGMP11217 842 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 MX2P20592 715 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 PRLHRP49683 370 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 KRT81Q14533 505 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 NOMO1Q15155 1222 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 SLC5A12Q1EHB4 618 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 TUBB8Q3ZCM7 444 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 ATP13A4Q4VNC1 1196 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 FNBP1LQ5T0N5 605 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 CCDC122Q5T0U0 273 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 ZDHHC20Q5W0Z9 365 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 TLDC1Q6P9B6 456 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 TMEM207Q6UWW9 146 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 FAM151BQ6UXP7 276 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 Q6ZPB1 254 aaPredicted RBP7.4□□□□□ -1.22
SMC3-202ENST00000462899 OVCH1Q7RTY7 1134 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 NT5DC3Q86UY8 548 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 CPNE8Q86YQ8 564 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 FAM20CQ8IXL6 584 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 DNAJC22Q8N4W6 341 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 ZNF655Q8N720 491 aaPredicted RBP7.4□□□□□ -1.22
SMC3-202ENST00000462899 PLD5Q8N7P1 536 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 OR1N1Q8NGS0 311 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 SPATA22Q8NHS9 363 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 GDAP1Q8TB36 358 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 LCN9Q8WX39 176 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 HAS2Q92819 552 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 GTPBP3Q969Y2 492 aaKnown RBP7.4□□□□□ -1.22
SMC3-202ENST00000462899 THOC3Q96J01 351 aaKnown RBP7.4□□□□□ -1.22
SMC3-202ENST00000462899 TTC25Q96NG3 672 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 OLFM3Q96PB7 478 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 OR2A14Q96R47 310 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 SRPK1Q96SB4 655 aaKnown RBP7.4□□□□□ -1.22
SMC3-202ENST00000462899 TMEM121Q9BTD3 319 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 CEP41Q9BYV8 373 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 SLC7A5P2Q9GIP4 190 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 HSD3B7Q9H2F3 369 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 SRMSQ9H3Y6 488 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 TRABDQ9H4I3 376 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 HAUS4Q9H6D7 363 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 MRM3Q9HC36 420 aaKnown RBP7.4□□□□□ -1.22
SMC3-202ENST00000462899 CBX8Q9HC52 389 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 MRPL47Q9HD33 250 aaKnown RBP7.4□□□□□ -1.22
SMC3-202ENST00000462899 DLL4Q9NR61 685 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.4□□□□□ -1.22
SMC3-202ENST00000462899 TNFRSF10DQ9UBN6 386 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 LIMA1Q9UHB6 759 aaKnown RBP7.4□□□□□ -1.22
SMC3-202ENST00000462899 ZNF232Q9UNY5 417 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 ICKQ9UPZ9 632 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 HEBP2Q9Y5Z4 205 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 COLEC10Q9Y6Z7 277 aa7.4□□□□□ -1.22
SMC3-202ENST00000462899 ANK3Q12955 4377 aaKnown RBP7.4□□□□□ -1.22
SMC3-202ENST00000462899 ANK2Q01484 3957 aa7.4□□□□□ -1.23
SMC3-202ENST00000462899 TRAV17A0A0B4J275 112 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 GLYATL1P3A0A0U1RQE8 302 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 C17orf113A0A1B0GUU1 675 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 LRRC53A6NM62 1247 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 SLC19A2O60779 497 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 HPP00738 406 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 CCDC172P0C7W6 258 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 TPBGLP0DKB5 382 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 UGT2B7P16662 529 aa7.39□□□□□ -1.23
SMC3-202ENST00000462899 PEBP1P30086 187 aaKnown RBP7.39□□□□□ -1.23
SMC3-202ENST00000462899 CD68P34810 354 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms