RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	ZNF789	Q5FWF6	425 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	CTSL3P	Q5NE16	218 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	DNTTIP2	Q5QJE6	756 aa	Known RBP	12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	CACHD1	Q5VU97	1274 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	CAPRIN2	Q6IMN6	1127 aa	Known RBP	12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	CYB5D1	Q6P9G0	228 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	ATG14	Q6ZNE5	492 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	PRICKLE2	Q7Z3G6	844 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	CTAGE6	Q86UF2	777 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	IGDCC3	Q8IVU1	814 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	CTAGE4	Q8IX94	777 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	ACVR1C	Q8NER5	493 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	OR5AR1	Q8NGP9	310 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	ZFPM2	Q8WW38	1151 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	STARD8	Q92502	1023 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	LPGAT1	Q92604	370 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	CERS2	Q96G23	380 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	TCF12	Q99081	682 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	CD180	Q99467	661 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	CARD6	Q9BX69	1037 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	ULBP3	Q9BZM4	244 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	P2RY12	Q9H244	342 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	SRMS	Q9H3Y6	488 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	XKR8	Q9H6D3	395 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	KIR3DX1	Q9H7L2	352 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	INTS10	Q9NVR2	710 aa	Known RBP	12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	WHRN	Q9P202	907 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	CIDEB	Q9UHD4	219 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	SLC24A2	Q9UI40	661 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	PLAGL1	Q9UM63	463 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	MRFAP1	Q9Y605	127 aa		12.34	□□□□□ -0.43
FDPS-204	ENST00000461507	ESYT3	A0FGR9	886 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	SLC5A10	A0PJK1	596 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	OR5K3	A6NET4	321 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	KPNA5	O15131	536 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	KDM1A	O60341	852 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	ESR1	P03372	595 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	PKM	P14618	531 aa	Known RBP	12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	POLR2C	P19387	275 aa	Predicted RBP	12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	RPS3	P23396	243 aa	Known RBP eCLIP	12.33	□□□□□ -0.44	1e-7	■■□□□ 13.7
FDPS-204	ENST00000461507	CCR10	P46092	362 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	PPP1CA	P62136	330 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	GUCY2D	Q02846	1103 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	FOXM1	Q08050	763 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	FASTKD3	Q14CZ7	662 aa	Known RBP	12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	ZNF658B	Q4V348	819 aa	Predicted RBP	12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	TTC23L	Q6PF05	361 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	CNST	Q6PJW8	725 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	C6orf15	Q6UXA7	325 aa	Predicted RBP	12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	UNC5A	Q6ZN44	842 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	KMT5C	Q86Y97	462 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	PALM2	Q8IXS6	379 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	LMNTD2	Q8IXW0	634 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	CARF	Q8N187	725 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	OR52E1	Q8NGJ3	308 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	PYROXD1	Q8WU10	500 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	LRRC39	Q96DD0	335 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	FOPNL	Q96NB1	174 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	FCRL4	Q96PJ5	515 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	OR6C1	Q96RD1	312 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	NDN	Q99608	321 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	CLMP	Q9H6B4	373 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	MVB12B	Q9H7P6	319 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	HRASLS2	Q9NWW9	162 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	SLC17A6	Q9P2U8	582 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	FBXO5	Q9UKT4	447 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	PCDHGA6	Q9Y5G7	932 aa		12.33	□□□□□ -0.44
FDPS-204	ENST00000461507	IGHV5-51	A0A0C4DH38	117 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	TLCD2	A6NGC4	264 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	KIAA0754	O94854	1291 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	S1PR4	O95977	384 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	RECK	O95980	971 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	RPN2	P04844	631 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	F8A1	P23610	371 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	AOAH	P28039	575 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	BDKRB1	P46663	353 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	CD151	P48509	253 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	CSRP3	P50461	194 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	NFKB2	Q00653	900 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	CUL1	Q13616	776 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	TUBB2A	Q13885	445 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	TTLL9	Q3SXZ7	439 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	ZNF572	Q7Z3I7	529 aa	Predicted RBP	12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	TAX1BP1	Q86VP1	789 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	BPHL	Q86WA6	291 aa	Predicted RBP	12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	VRK3	Q8IV63	474 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	SLC22A15	Q8IZD6	547 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	D2HGDH	Q8N465	521 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	ZBTB2	Q8N680	514 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	GPATCH11	Q8N954	259 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	SIDT2	Q8NBJ9	832 aa	Known RBP	12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	GALNT6	Q8NCL4	622 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	RNF31	Q96EP0	1072 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	BIRC8	Q96P09	236 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	LRRC1	Q9BTT6	524 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	TUBB2B	Q9BVA1	445 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	SOHLH2	Q9NX45	425 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	ZFAT	Q9P243	1243 aa		12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	RUVBL2	Q9Y230	463 aa	Known RBP	12.32	□□□□□ -0.44
FDPS-204	ENST00000461507	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms