RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 DTX3Q8N9I9 347 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 PIK3R3Q92569 461 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 MTRRQ9UBK8 725 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 ZNF541Q9H0D2 1346 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 LINGO3P0C6S8 592 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 ASPAP45381 313 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 DCDC1P59894 354 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 SLC3A1Q07837 685 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 C2orf27AQ580R0 203 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 ZDHHC20Q5W0Z9 365 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 ZNF782Q6ZMW2 699 aaPredicted RBP19.29■□□□□ 0.68
SNX27-204ENST00000458013 TRIM43Q96BQ3 446 aaPredicted RBP19.29■□□□□ 0.68
SNX27-204ENST00000458013 TIFAQ96CG3 184 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 FAM163AQ96GL9 167 aaPredicted RBP19.29■□□□□ 0.68
SNX27-204ENST00000458013 TTC34A8MYJ7 566 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 UBXN2BQ14CS0 331 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 CTU1Q7Z7A3 348 aaKnown RBP19.29■□□□□ 0.68
SNX27-204ENST00000458013 ZSCAN5AQ9BUG6 496 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 UNC93B1Q9H1C4 597 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 HPF1Q9NWY4 346 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 ENPP7Q6UWV6 458 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 GATA5Q9BWX5 397 aaPredicted RBP19.29■□□□□ 0.68
SNX27-204ENST00000458013 LGR4Q9BXB1 951 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 ZNF395Q9H8N7 513 aaPredicted RBP19.29■□□□□ 0.68
SNX27-204ENST00000458013 ELOVL2Q9NXB9 296 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 SPIN1Q9Y657 262 aaPredicted RBP19.29■□□□□ 0.68
SNX27-204ENST00000458013 PBX1P40424 430 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 IFI44LQ53G44 452 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 XKR4Q5GH76 650 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 NSMCE3Q96MG7 304 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 TIMM8BQ9Y5J9 83 aaPredicted RBP19.29■□□□□ 0.68
SNX27-204ENST00000458013 KLK1P06870 262 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 KELP23276 732 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 GRK5P34947 590 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 KHKP50053 298 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 GDI2P50395 445 aaKnown RBP19.28■□□□□ 0.68
SNX27-204ENST00000458013 BEND7Q8N7W2 519 aaPredicted RBP19.28■□□□□ 0.68
SNX27-204ENST00000458013 DNAJA4Q8WW22 397 aaPredicted RBP19.28■□□□□ 0.68
SNX27-204ENST00000458013 ASB12Q8WXK4 309 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 CENPMQ9NSP4 180 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 MGAT4AQ9UM21 535 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 YJEFN3A6XGL0 299 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 KMOO15229 486 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 RPL10P27635 214 aaKnown RBP19.28■□□□□ 0.68
SNX27-204ENST00000458013 GGT5P36269 586 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 MMP14P50281 582 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 NUDT6P53370 316 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 PRKCDQ05655 676 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 METTL27Q8N6F8 245 aaPredicted RBP19.28■□□□□ 0.68
SNX27-204ENST00000458013 HEPHQ9BQS7 1158 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 ADAP2Q9NPF8 381 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 RHCGQ9UBD6 479 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 FBXW11Q9UKB1 542 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 STXBP5LQ9Y2K9 1186 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 A0A1W2PRU2 124 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 A8MV72 311 aaPredicted RBP19.28■□□□□ 0.68
SNX27-204ENST00000458013 OR1I1O60431 355 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 ACP5P13686 325 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 TPTEP56180 551 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 SLC10A7Q0GE19 358 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 ABCA11PQ4W5N1 156 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 SLC35A5Q9BS91 424 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 SLC2A6Q9UGQ3 507 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 OR14I1A6ND48 311 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 EI24O14681 340 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 NDUFS4O43181 175 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 S100A10P60903 97 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 XIAPP98170 497 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 SP2Q02086 613 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 TIGD6Q17RP2 521 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 LIN52Q52LA3 116 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 C1orf94Q6P1W5 598 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 PROKR2Q8NFJ6 384 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 CXorf49A8MYA2 514 aaPredicted RBP19.28■□□□□ 0.68
SNX27-204ENST00000458013 PCDH7O60245 1069 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 FSHRP23945 695 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 DGKGP49619 791 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 RPS14P62263 151 aaKnown RBP19.28■□□□□ 0.68
SNX27-204ENST00000458013 BTN3A2P78410 334 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 PRR5P85299 388 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 SPPL2BQ8TCT7 592 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 SLC25A51Q9H1U9 297 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 SLC28A3Q9HAS3 691 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 IL36AQ9UHA7 158 aa19.28■□□□□ 0.68
SNX27-204ENST00000458013 BCHEP06276 602 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 TAF1AQ15573 450 aaPredicted RBP19.27■□□□□ 0.68
SNX27-204ENST00000458013 PRAMEF17Q5VTA0 474 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 Q8N9G6 341 aaPredicted RBP19.27■□□□□ 0.68
SNX27-204ENST00000458013 PKP4Q99569 1192 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 ZNF20P17024 532 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 LAG3P18627 525 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 CLCN4P51793 760 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 NR0B1P51843 470 aaKnown RBP19.27■□□□□ 0.68
SNX27-204ENST00000458013 SLC24A5Q71RS6 500 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 CCDC36Q8IYA8 594 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 NUS1Q96E22 293 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 DUSP26Q9BV47 211 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 GKN1Q9NS71 199 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 MOCS1Q9NZB8 636 aa19.27■□□□□ 0.68
SNX27-204ENST00000458013 NFATC1O95644 943 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms