RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 CDKL4Q5MAI5 379 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 ZNF697Q5TEC3 545 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 CYP20A1Q6UW02 462 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 SCIMPQ6UWF3 145 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 CHMP1BQ7LBR1 199 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 PTF1AQ7RTS3 328 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 SLC15A3Q8IY34 581 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 FAM46DQ8NEK8 389 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 OR5H6Q8NGV6 325 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 OR5J2Q8NH18 312 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 RPLP0P6Q8NHW5 317 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 DNAJB3Q8WWF6 145 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 GEMIN6Q8WXD5 167 aaKnown RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 THRSPQ92748 146 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 USP7Q93009 1102 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 PPCDCQ96CD2 204 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 BORCS6Q96GS4 357 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 TBATAQ96M53 351 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 FCRL5Q96RD9 977 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 BBS4Q96RK4 519 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 S100A13Q99584 98 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 SLC29A3Q9BZD2 475 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 ULBP1Q9BZM6 244 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 UCK2Q9BZX2 261 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 TIGARQ9NQ88 270 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 AGPAT4Q9NRZ5 378 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 ERVK-18Q9QC07 812 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 BAZ2BQ9UIF8 2168 aaKnown RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 MYH10P35580 1976 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 MEGF6O75095 1541 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 CLCA1A8K7I4 914 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 CHURC1-FNTBB4DL54 471 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 GMDSO60547 372 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 FOXD2O60548 495 aaPredicted RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 MAFO75444 373 aaPredicted RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 ALDH1A1P00352 501 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 NR2F1P10589 423 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 POLR2CP19387 275 aaPredicted RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 CDH5P33151 784 aaPredicted RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 CDKL1Q00532 357 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 SLC25A11Q02978 314 aaKnown RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 CACNB2Q08289 660 aaPredicted RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 FGL1Q08830 312 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 DSC3Q14574 896 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 USF2Q15853 346 aaPredicted RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 ZBTB6Q15916 424 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 PROX2Q3B8N5 592 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 TMEM192Q8IY95 271 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 SPATA6LQ8N4H0 392 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 OXR1Q8N573 874 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 DENND6BQ8NEG7 585 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 CLP1Q92989 425 aaKnown RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 C7orf50Q9BRJ6 194 aaKnown RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 ATXN3LQ9H3M9 355 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 ENAMQ9NRM1 1142 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 SEMA3GQ9NS98 782 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 TAS2R3Q9NYW6 316 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 DTLQ9NZJ0 730 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 MAT2BQ9NZL9 334 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 SLC25A13Q9UJS0 675 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 ENTPD4Q9Y227 616 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 RUVBL1Q9Y265 456 aaKnown RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 PXDNQ92626 1479 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 FAM208AQ9UK61 1670 aaKnown RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 TMEM131LA2VDJ0 1609 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 MEIOCA2RUB1 952 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 C1orf196B1AJZ1 125 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 ISM1B1AKI9 464 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 C9IYK1 514 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 LRRN3E7EW58 273 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 H3BM21 787 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 FFAR3O14843 346 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 GPR42O15529 346 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 STK16O75716 305 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 DNTTP04053 509 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 IFNA6P05013 189 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 CD48P09326 243 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 COL6A1P12109 1028 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 PRKAR2AP13861 404 aaKnown RBP4.9□□□□□ -1.62
PCDH9-203ENST00000456367 ARHGDIBP52566 201 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 NKX2-5P52952 324 aaPredicted RBP4.9□□□□□ -1.62
PCDH9-203ENST00000456367 PSMA6P60900 246 aaKnown RBP4.9□□□□□ -1.62
PCDH9-203ENST00000456367 RPL6Q02878 288 aaKnown RBP4.9□□□□□ -1.62
PCDH9-203ENST00000456367 FXNQ16595 210 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 FAM174BQ3ZCQ3 159 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 ZNF311Q5JNZ3 666 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 IDNKQ5T6J7 187 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 ARMC12Q5T9G4 340 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 TAPT1Q6NXT6 567 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 VSIG10LQ86VR7 867 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 RNF130Q86XS8 419 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 ZFPM1Q8IX07 1006 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 FAM20CQ8IXL6 584 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 LGI4Q8N135 537 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 Q8N402 240 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 ANKRD53Q8N9V6 530 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 HJURPQ8NCD3 748 aaPredicted RBP4.9□□□□□ -1.62
PCDH9-203ENST00000456367 SGTBQ96EQ0 304 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 SLC39A13Q96H72 371 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 PRR11Q96HE9 360 aaPredicted RBP4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms