RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 TMA16Q96EY4 203 aaKnown RBP5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 TSPAN17Q96FV3 270 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 CELF6Q96J87 481 aaKnown RBP5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 CMTM3Q96MX0 182 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 CD180Q99467 661 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 PIP5K1AQ99755 562 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 MESP1Q9BRJ9 268 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 MRI1Q9BV20 369 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 MECRQ9BV79 373 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 FAM129AQ9BZQ8 928 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 NEUROG2Q9H2A3 272 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 TTYH1Q9H313 450 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 NSUN3Q9H649 340 aaKnown RBP5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 OPA3Q9H6K4 179 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 SFXN1Q9H9B4 322 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 BEX4Q9NWD9 120 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 FBXO34Q9NWN3 711 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 ZNF446Q9NWS9 450 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 C5AR2Q9P296 337 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 DNAJB11Q9UBS4 358 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 SLC25A10Q9UBX3 287 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 GPR160Q9UJ42 338 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 LSM7Q9UK45 103 aaKnown RBP5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 CDC42EP3Q9UKI2 254 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 SHOC2Q9UQ13 582 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 CCL26Q9Y258 94 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 SLC5A6Q9Y289 635 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 SZT2Q5T011 3432 aa5.15□□□□□ -1.59
HMGB1P4-201ENST00000455362 NUP210Q8TEM1 1887 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 A0A0U1RQK1 487 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 A0A1B0GVM2 712 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 A0A1W2PPC1 479 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ILVBLA1L0T0 632 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ZNF320A2RRD8 509 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 TCAF2A6NFQ2 919 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 GAGE10A6NGK3 116 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ARHGAP42A6NI28 874 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 SH2D7A6NKC9 451 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 KCNK1O00180 336 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 RNF103O00237 685 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 DFFAO00273 331 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 DNALI1O14645 258 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 MATN3O15232 486 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 PRAMEF12O95522 483 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 PEX11BO96011 259 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 JCHAINP01591 159 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 EIF2S1P05198 315 aaKnown RBP5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 HOXB8P17481 243 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 OR1E1P30953 314 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 MAGEA6P43360 314 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 MAPKAPK2P49137 400 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 SGSHP51688 502 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 CDH4P55283 916 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 EIF3BP55884 814 aaKnown RBP5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ZNF177Q13360 481 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 MORF4L2Q15014 288 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 PPA1Q15181 289 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 CR1LQ2VPA4 569 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 PARP15Q460N3 678 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 TEX44Q53QW1 395 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ZNF805Q5CZA5 627 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 C9orf152Q5JTZ5 239 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ANKRD20A2Q5SQ80 823 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ARMC4Q5T2S8 1044 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 RNASEH2BQ5TBB1 312 aaKnown RBP5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ANKRD20A1Q5TYW2 823 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ANKRD20A3Q5VUR7 823 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ANKRD54Q6NXT1 300 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ABRAXAS1Q6UWZ7 409 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 CHST9Q7L1S5 443 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 SLC9B2Q86UD5 537 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ARID3BQ8IVW6 561 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 BBS7Q8IWZ6 715 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 CCDC13Q8IYE1 715 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 LILRA2Q8N149 483 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ZNF567Q8N184 647 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 CPXM2Q8N436 756 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 POC5Q8NA72 575 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 TDRD5Q8NAT2 981 aaKnown RBP5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 HJURPQ8NCD3 748 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 RFWD2Q8NHY2 731 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 CCDC110Q8TBZ0 833 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ING5Q8WYH8 240 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ARHGEF2Q92974 986 aaKnown RBP5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 HDAC11Q96DB2 347 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 ELP4Q96EB1 424 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 HMCESQ96FZ2 354 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 REXO5Q96IC2 774 aaKnown RBP5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 PRICKLE1Q96MT3 831 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 GDAP1L1Q96MZ0 367 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 SPATA13Q96N96 652 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 LRRC3BQ96PB8 259 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 FMO2Q99518 471 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 IL12RB2Q99665 862 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 FERMT1Q9BQL6 677 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 FUT8Q9BYC5 575 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 TSPYL1Q9H0U9 437 aa5.14□□□□□ -1.59
HMGB1P4-201ENST00000455362 S1PR5Q9H228 398 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms