RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 CLK4Q9HAZ1 481 aaKnown RBP11.7□□□□□ -0.54
SMPD4-213ENST00000454468 PNPLA3Q9NST1 481 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 C1orf109Q9NX04 203 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 ZDHHC3Q9NYG2 299 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 HCFC2Q9Y5Z7 792 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 TBC1D3BA6NDS4 549 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 FXYD1O00168 92 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 MANBAO00462 879 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 H6PDO95479 791 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 TFAP2AP05549 437 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 ZNF26P17031 533 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-213ENST00000454468 LHCGRP22888 699 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 TACR1P25103 407 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 ALDH9A1P49189 494 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 RPS14P62263 151 aaKnown RBP11.7□□□□□ -0.54
SMPD4-213ENST00000454468 CYP4F3Q08477 520 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 GDPD4Q6W3E5 623 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 CYP2U1Q7Z449 544 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 C11orf74Q86VG3 221 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 DTWD1Q8N5C7 304 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 ZNF555Q8NEP9 628 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 TMBIM1Q969X1 311 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 MRPS26Q9BYN8 205 aaKnown RBP11.7□□□□□ -0.54
SMPD4-213ENST00000454468 AASSQ9UDR5 926 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 SNX6Q9UNH7 406 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 SNX8Q9Y5X2 465 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 GREB1Q4ZG55 1949 aa11.7□□□□□ -0.54
SMPD4-213ENST00000454468 WASH3PC4AMC7 463 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 SERPINA1P01009 418 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 IGHA2P01877 340 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 CCR2P41597 374 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 MAPK8P45983 427 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 DGKEP52429 567 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 ADARP55265 1226 aaKnown RBP11.69□□□□□ -0.54
SMPD4-213ENST00000454468 WDR5P61964 334 aaKnown RBP11.69□□□□□ -0.54
SMPD4-213ENST00000454468 DGCR6Q14129 220 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 SPRED2Q7Z698 418 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 GALNT15Q8N3T1 639 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 SPPL2AQ8TCT8 520 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 MAGED4Q96JG8 741 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 CCM2LQ9NUG4 571 aaPredicted RBP11.69□□□□□ -0.54
SMPD4-213ENST00000454468 PDE10AQ9Y233 779 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 DLGAP4Q9Y2H0 992 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 NYNRINQ9P2P1 1898 aaKnown RBP11.69□□□□□ -0.54
SMPD4-213ENST00000454468 ELOVL7A1L3X0 281 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 ZNF197O14709 1029 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 PCDH8O95206 1070 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 BCKDHAP12694 445 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 ELK4P28324 431 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 PPM1AP35813 382 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 CLCN4P51793 760 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 TNK2Q07912 1038 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 RCAN2Q14206 197 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 KRT33BQ14525 404 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 CYP27C1Q4G0S4 372 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 IER5LQ5T953 404 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 ANKRD34AQ69YU3 496 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 B3GNT6Q6ZMB0 384 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 TCEAL8Q8IYN2 117 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 MARVELD2Q8N4S9 558 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 FAM86B1Q8N7N1 296 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 ATG16L2Q8NAA4 619 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 SLC47A1Q96FL8 570 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 ZFRQ96KR1 1074 aaKnown RBP11.69□□□□□ -0.54
SMPD4-213ENST00000454468 DPH2Q9BQC3 489 aaPredicted RBP11.69□□□□□ -0.54
SMPD4-213ENST00000454468 TMEM106CQ9BVX2 250 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 SMPD3Q9NY59 655 aaPredicted RBP11.69□□□□□ -0.54
SMPD4-213ENST00000454468 SLC28A1O00337 649 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 NRG2O14511 850 aaPredicted RBP11.69□□□□□ -0.54
SMPD4-213ENST00000454468 TAPBPO15533 448 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 TSPAN6O43657 245 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 RHOP08100 348 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 ITGB8P26012 769 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 EMX2Q04743 252 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 ARTNQ5T4W7 220 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 MINDY1Q8N5J2 469 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 POF1BQ8WVV4 589 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 OVCA2Q8WZ82 227 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 RHBDF1Q96CC6 855 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 INPP5KQ9BT40 448 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 HTATIP2Q9BUP3 242 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 OR2AG1Q9H205 316 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 SGK2Q9HBY8 427 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 CD300AQ9UGN4 299 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 UTS2RQ9UKP6 389 aa11.69□□□□□ -0.54
SMPD4-213ENST00000454468 FCGR1AP12314 374 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 ATP1B2P14415 290 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-213ENST00000454468 EPCAMP16422 314 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 IL7RP16871 459 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 ARHGDIAP52565 204 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 GRIN2CQ14957 1233 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 CMPK2Q5EBM0 449 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 HORMAD1Q86X24 394 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 TBC1D21Q8IYX1 336 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 ADGRG5Q8IZF4 528 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 OR7A2PQ8NGA2 310 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 ASZ1Q8WWH4 475 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 HEPHQ9BQS7 1158 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 RMND5AQ9H871 391 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 RASSF1Q9NS23 344 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms