RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 HIST1H2AHQ96KK5 128 aa13.58□□□□□ -0.24
UBE2D3-210ENST00000453744 HIST1H2AJQ99878 128 aa13.58□□□□□ -0.24
UBE2D3-210ENST00000453744 H2AFJQ9BTM1 129 aa13.58□□□□□ -0.24
UBE2D3-210ENST00000453744 SMPD4Q9NXE4 827 aa13.58□□□□□ -0.24
UBE2D3-210ENST00000453744 FAM47E-STBD1D6RA91 191 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 OPN1SWP03999 348 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 COQ5Q5HYK3 327 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 GNASQ5JWF2 1037 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 B3GNT8Q7Z7M8 397 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 ADAMTSL2Q86TH1 951 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 PTRH1Q86Y79 214 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 SYT12Q8IV01 421 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 IGSF8Q969P0 613 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 PYCR2Q96C36 320 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 COQ7Q99807 217 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 TINF2Q9BSI4 451 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 SMOC2Q9H3U7 446 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 TMEM161AQ9NX61 479 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 RAPGEFL1Q9UHV5 662 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 SLCO3A1Q9UIG8 710 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 A0A0D9SEW6 157 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 SMIM35A0A1B0GVV1 85 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 SAGE2PA6NJ88 616 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 CXCL11O14625 94 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 GPR32O75388 356 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 JRKO75564 520 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 EPN2O95208 641 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 FABP3P05413 133 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 THPOP40225 353 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 HSPA14Q0VDF9 509 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 NKG7Q16617 165 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 STEAP3Q658P3 488 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 OR4F3Q6IEY1 312 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 USP51Q70EK9 711 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 TMEM179BQ7Z7N9 219 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 LRRTM3Q86VH5 581 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 ASB8Q9H765 288 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 CARS2Q9HA77 564 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 TTC3P53804 2025 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 M0R129 80 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 FFAR2O15552 330 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 PAPSS2O95340 614 aaPredicted RBP13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 RHOCP08134 193 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 COX7A2P14406 83 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 OGNP20774 298 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 PBX3P40426 434 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 GTF2IRD2BQ6EKJ0 949 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 GTF2IRD2Q86UP8 949 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 PIANPQ8IYJ0 282 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 CAMKK1Q8N5S9 505 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 ITPAQ9BY32 194 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 IKZF5Q9H5V7 419 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 NECTIN3Q9NQS3 549 aa13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 POLR3BQ9NW08 1133 aaPredicted RBP13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 SAMD4AQ9UPU9 718 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-210ENST00000453744 ARPC4P59998 168 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 ZNF33AQ06730 810 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 CTF1Q16619 201 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 ZNF598Q86UK7 904 aaKnown RBP13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 TRIM48Q8IWZ4 208 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 CELF2-AS1Q8N7Q2 184 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 RHOXF1Q8NHV9 184 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 MBOAT4Q96T53 435 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 DPH2Q9BQC3 489 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 TRIT1Q9H3H1 467 aaKnown RBP13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 AASDHPPTQ9NRN7 309 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 SPO11Q9Y5K1 396 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 FAM92AA1XBS5 289 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 SLC25A14O95258 325 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 HPRP00739 348 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 PRIM2P49643 509 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 ISL1P61371 349 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 RPP38P78345 283 aaKnown RBP13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 ELP6Q0PNE2 266 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 SMARCB1Q12824 385 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 CYP27C1Q4G0S4 372 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 MBOAT1Q6ZNC8 495 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 MYDGFQ969H8 173 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 MTERF3Q96E29 417 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 TLR8Q9NR97 1041 aaKnown RBP13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 PCDHGA10Q9Y5H3 936 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 LOC730098B7Z3J9 87 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 PDHXO00330 501 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 DYRK3O43781 588 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 UPK1BO75841 260 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 CSF2P04141 144 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 CRYBB1P53674 252 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 GABARAPL2P60520 117 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 RPS14P62263 151 aaKnown RBP13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 ZNF177Q13360 481 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 DPY19L1Q2PZI1 675 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 SLC16A12Q6ZSM3 486 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 CYP2U1Q7Z449 544 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 HS6ST3Q8IZP7 471 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 OR9Q1Q8NGQ5 310 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 RDH12Q96NR8 316 aa13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 SMAD5Q99717 465 aaKnown RBP13.56□□□□□ -0.24
UBE2D3-210ENST00000453744 BARD1Q99728 777 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms