RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 KIR2DS5A0A0G2JLQ3 304 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 A0A0G2JNG1 304 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 OR52A4PA6NMU1 304 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 KIR2DS3K7RE56 304 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 ITM2AO43736 263 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 STK16O75716 305 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 PIAS2O75928 621 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 SUPT7LO94864 414 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 XRCC1P18887 633 aaPredicted RBP18.73■□□□□ 0.59
RPS28-202ENST00000449223 KIR2DS5Q14953 304 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 DUOXA1Q1HG43 343 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 LRRC70Q7Z2Q7 622 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 TAF8Q7Z7C8 310 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 GKN2Q86XP6 184 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 LRRC34Q8IZ02 419 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 LSMEM2Q8N112 164 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 CCNYL1Q8N7R7 359 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 ZNF548Q8NEK5 533 aaPredicted RBP18.73■□□□□ 0.59
RPS28-202ENST00000449223 PIGKQ92643 395 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 ELF4Q99607 663 aaPredicted RBP18.73■□□□□ 0.59
RPS28-202ENST00000449223 KIR3DX1Q9H7L2 352 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 CAPN10Q9HC96 672 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 IMP3Q9NV31 184 aaKnown RBP18.73■□□□□ 0.59
RPS28-202ENST00000449223 ZNF624Q9P2J8 865 aaPredicted RBP18.73■□□□□ 0.59
RPS28-202ENST00000449223 ASB1Q9Y576 335 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 CFAP20Q9Y6A4 193 aaKnown RBP18.73■□□□□ 0.59
RPS28-202ENST00000449223 CSNK1G3Q9Y6M4 447 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 COLEC10Q9Y6Z7 277 aa18.73■□□□□ 0.59
RPS28-202ENST00000449223 LAMA1P25391 3075 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 LRRC14BA6NHZ5 514 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 LMO7DNF2Z398 122 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 AQP9O43315 295 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 PIK3CGP48736 1102 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 SEC24CP53992 1094 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 LCP2Q13094 533 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 ZNF423Q2M1K9 1284 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 ARL13AQ5H913 290 aaPredicted RBP18.72■□□□□ 0.59
RPS28-202ENST00000449223 SLC23A3Q6PIS1 610 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 AGTRAPQ6RW13 159 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 LRRC56Q8IYG6 542 aaPredicted RBP18.72■□□□□ 0.59
RPS28-202ENST00000449223 SFRP1Q8N474 314 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 OR56A3Q8NH54 315 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 HMGCLL1Q8TB92 370 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 ZNF480Q8WV37 535 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 RAB11FIP5Q9BXF6 653 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 CAAP1Q9H8G2 361 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 ZBTB26Q9HCK0 441 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 POT1Q9NUX5 634 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.72■□□□□ 0.59
RPS28-202ENST00000449223 PCDHGA5Q9Y5G8 931 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 SNX11Q9Y5W9 270 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 DMDP11532 3685 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 CACNA1HO95180 2353 aa18.72■□□□□ 0.59
RPS28-202ENST00000449223 KRT87PA6NCN2 255 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 K7EPI3 171 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 DFNA5O60443 496 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 TGDSO95455 350 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 MLYCDO95822 493 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 VIMP08670 466 aaKnown RBP18.71■□□□□ 0.59
RPS28-202ENST00000449223 HSPA7P48741 367 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 CLCQ05315 142 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 CYP2A13Q16696 494 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 PTCHD3Q3KNS1 767 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 DUS1LQ6P1R4 473 aaKnown RBP18.71■□□□□ 0.59
RPS28-202ENST00000449223 ZC3H14Q6PJT7 736 aaKnown RBP18.71■□□□□ 0.59
RPS28-202ENST00000449223 KIRREL3Q8IZU9 778 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 NAGSQ8N159 534 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 MOCOSQ96EN8 888 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 CAMK1GQ96NX5 476 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 PITPNM3Q9BZ71 974 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 TWSG1Q9GZX9 223 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 SLC32A1Q9H598 525 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 FGFR1OP2Q9NVK5 253 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 OPTCQ9UBM4 332 aa18.71■□□□□ 0.59
RPS28-202ENST00000449223 ZNF839A8K0R7 811 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 E7ENX8 843 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 KDM1AO60341 852 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 LYPLA1O75608 230 aaPredicted RBP18.7■□□□□ 0.58
RPS28-202ENST00000449223 EPN2O95208 641 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 CHRNGP07510 517 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 DRD4P21917 467 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 SLC19A1P41440 591 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 ARRB1P49407 418 aaPredicted RBP18.7■□□□□ 0.58
RPS28-202ENST00000449223 UBE2IP63279 158 aaKnown RBP18.7■□□□□ 0.58
RPS28-202ENST00000449223 TAP2Q03519 686 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 PCDH1Q08174 1060 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 C1orf61Q13536 156 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 C18orf21Q32NC0 220 aaPredicted RBP18.7■□□□□ 0.58
RPS28-202ENST00000449223 FBXO48Q5FWF7 155 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 FAM47EQ6ZV65 393 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 C17orf82Q86X59 251 aaPredicted RBP18.7■□□□□ 0.58
RPS28-202ENST00000449223 AVL9Q8NBF6 648 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 PPP4R1Q8TF05 950 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 ESAMQ96AP7 390 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 NSUN5Q96P11 429 aaKnown RBP18.7■□□□□ 0.58
RPS28-202ENST00000449223 FERD3LQ96RJ6 166 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 SGPP1Q9BX95 441 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 ZNF395Q9H8N7 513 aaPredicted RBP18.7■□□□□ 0.58
RPS28-202ENST00000449223 EML4Q9HC35 981 aaKnown RBP18.7■□□□□ 0.58
RPS28-202ENST00000449223 STK38LQ9Y2H1 464 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms