RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 ERP44Q9BS26 406 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 SLC12A9Q9BXP2 914 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 RAB17Q9H0T7 212 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 SLC25A18Q9H1K4 315 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 XKR8Q9H6D3 395 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 POLG2Q9UHN1 485 aa14.14□□□□□ -0.15
USP39-206ENST00000448971 B4E171 279 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 MATN2O00339 956 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 BTN3A1O00481 513 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 GPC4O75487 556 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 ERVK-10P10266 1014 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 ACADLP28330 430 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 SHMT2P34897 504 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 TSPAN7P41732 249 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 WHAMMP3Q1A5X7 153 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 DCAF12Q5T6F0 453 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 ANKS6Q68DC2 871 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 UNC5AQ6ZN44 842 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 ZNF572Q7Z3I7 529 aaPredicted RBP14.13□□□□□ -0.15
USP39-206ENST00000448971 AMIGO1Q86WK6 493 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 DCUN1D3Q8IWE4 304 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 ZBTB2Q8N680 514 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 MAP3K3Q99759 626 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 CTRCQ99895 268 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 DDA1Q9BW61 102 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 TFB2MQ9H5Q4 396 aaKnown RBP14.13□□□□□ -0.15
USP39-206ENST00000448971 SOHLH2Q9NX45 425 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 FBXO5Q9UKT4 447 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 PLAGL1Q9UM63 463 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 ICKQ9UPZ9 632 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 CDYLQ9Y232 598 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 PCDHB11Q9Y5F2 797 aa14.13□□□□□ -0.15
USP39-206ENST00000448971 S1PR4O95977 384 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 CDH3P22223 829 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 BDKRB1P46663 353 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 TLE1Q04724 770 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 ABRQ12979 859 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 TTLL9Q3SXZ7 439 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 PLEKHS1Q5SXH7 462 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 CYB5D1Q6P9G0 228 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 CNSTQ6PJW8 725 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 UNC5DQ6UXZ4 953 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 CEACAM20Q6UY09 585 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 IGDCC3Q8IVU1 814 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 ZBED8Q8IZ13 594 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 BMPERQ8N8U9 685 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 SIDT2Q8NBJ9 832 aaKnown RBP14.12□□□□□ -0.15
USP39-206ENST00000448971 FBXO36Q8NEA4 188 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 NKD1Q969G9 470 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 FOPNLQ96NB1 174 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 TEFMQ96QE5 360 aaKnown RBP14.12□□□□□ -0.15
USP39-206ENST00000448971 WDR83Q9BRX9 315 aaKnown RBP14.12□□□□□ -0.15
USP39-206ENST00000448971 ASPSCR1Q9BZE9 553 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 SIDT1Q9NXL6 827 aaKnown RBP14.12□□□□□ -0.15
USP39-206ENST00000448971 WHRNQ9P202 907 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 POMT2Q9UKY4 750 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 RUVBL2Q9Y230 463 aaKnown RBP14.12□□□□□ -0.15
USP39-206ENST00000448971 B3GALT1Q9Y5Z6 326 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 TEX15Q9BXT5 2789 aa14.12□□□□□ -0.15
USP39-206ENST00000448971 USP9XQ93008 2570 aaPredicted RBP14.12□□□□□ -0.15
USP39-206ENST00000448971 SPTAN1Q13813 2472 aaKnown RBP14.12□□□□□ -0.15
USP39-206ENST00000448971 PIKFYVEQ9Y2I7 2098 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 IGHV5-51A0A0C4DH38 117 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 C2orf74A8MZ97 194 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 STMND1H3BQB6 276 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 BTN3A3O00478 584 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 POLR1CO15160 346 aaPredicted RBP14.11□□□□□ -0.15
USP39-206ENST00000448971 SLCO2B1O94956 709 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 TUBB4AP04350 444 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 CARSP49589 748 aaKnown RBP14.11□□□□□ -0.15
USP39-206ENST00000448971 KPNA2P52292 529 aaKnown RBP14.11□□□□□ -0.15
USP39-206ENST00000448971 SH3BP2P78314 561 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 MC2RQ01718 297 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 FASTKD3Q14CZ7 662 aaKnown RBP14.11□□□□□ -0.15
USP39-206ENST00000448971 TTC23LQ6PF05 361 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 CAPN12Q6ZSI9 719 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 C2CD4AQ8NCU7 369 aaPredicted RBP14.11□□□□□ -0.15
USP39-206ENST00000448971 KCNJ9Q92806 393 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 OR6C1Q96RD1 312 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 NRTNQ99748 197 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 ADNPQ9H2P0 1102 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 APMAPQ9HDC9 416 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 ACTR10Q9NZ32 417 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 SLC17A6Q9P2U8 582 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 CIDEBQ9UHD4 219 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 PCDHGA3Q9Y5H0 932 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 MRFAP1Q9Y605 127 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 COMMD10Q9Y6G5 202 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 TEX264Q9Y6I9 313 aa14.11□□□□□ -0.15
USP39-206ENST00000448971 NOTCH2Q04721 2471 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 PIPSLA2A3N6 862 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 TP73O15350 636 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 GPR37O15354 613 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 VPS26AO75436 327 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 HAUS5O94927 633 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 ZBTB11O95625 1053 aaPredicted RBP14.1□□□□□ -0.15
USP39-206ENST00000448971 NELFEP18615 380 aaKnown RBP14.1□□□□□ -0.15
USP39-206ENST00000448971 ATP5DP30049 168 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 PKLRP30613 574 aa14.1□□□□□ -0.15
USP39-206ENST00000448971 TUBB3Q13509 450 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms