RNA–Protein interactions for RNA: ENST00000448786.1

AC007879.3-202, humanhuman

TSL 1 (best) BASIC

Gene AC007879.3, Length 823 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.3-202ENST00000448786 SIX2Q9NPC8 291 aa3.03□□□□□ -1.92
AC007879.3-202ENST00000448786 RRAGDQ9NQL2 400 aaPredicted RBP3.03□□□□□ -1.92
AC007879.3-202ENST00000448786 ATAD3AQ9NVI7 634 aa3.03□□□□□ -1.92
AC007879.3-202ENST00000448786 CHMP5Q9NZZ3 219 aa3.03□□□□□ -1.92
AC007879.3-202ENST00000448786 COPG2Q9UBF2 871 aa3.03□□□□□ -1.92
AC007879.3-202ENST00000448786 DBF4Q9UBU7 674 aaPredicted RBP3.03□□□□□ -1.92
AC007879.3-202ENST00000448786 TSPYL4Q9UJ04 414 aa3.03□□□□□ -1.92
AC007879.3-202ENST00000448786 EXOGQ9Y2C4 368 aaKnown RBP3.03□□□□□ -1.92
AC007879.3-202ENST00000448786 ZNF646O15015 1829 aaPredicted RBP3.03□□□□□ -1.93
AC007879.3-202ENST00000448786 LAMB2P55268 1798 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 LAMA2P24043 3122 aaKnown RBP3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 A0A1W2PRG0 241 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 MAGEB17A8MXT2 336 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 SYNCRIPO60506 623 aaKnown RBP3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 POLBP06746 335 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 LIFP15018 202 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 XBP1P17861 261 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 TYMPP19971 482 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 EIF2S2P20042 333 aaKnown RBP3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 CCT5P48643 541 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 SLC8A3P57103 927 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 PRICKLE4Q2TBC4 344 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 DPCR1Q3MIW9 517 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 GTDC1Q4AE62 458 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 CDONQ4KMG0 1287 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 ZNF805Q5CZA5 627 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 ARHGEF16Q5VV41 709 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 SPINK14Q6IE38 97 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 FASTKD5Q7L8L6 764 aaKnown RBP3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 SDCCAG8Q86SQ7 713 aaPredicted RBP3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 TICAM2Q86XR7 235 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 SMC5Q8IY18 1101 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 C1orf52Q8N6N3 182 aaKnown RBP3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 IWS1Q96ST2 819 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 SLX1AQ9BQ83 275 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 CABLES2Q9BTV7 478 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 HYPKQ9NX55 129 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 CWC15Q9P013 229 aaKnown RBP3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 KLHL8Q9P2G9 620 aaPredicted RBP3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 MKLN1Q9UL63 735 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 YIPF1Q9Y548 306 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 CAPN7Q9Y6W3 813 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 CDH23Q9H251 3354 aa3.02□□□□□ -1.93
AC007879.3-202ENST00000448786 RPAP1Q9BWH6 1393 aaPredicted RBP3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 IL16Q14005 1332 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 FAM205AQ6ZU69 1335 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 CCL15-CCL14A0A0B4J2E2 113 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 PRR32B1ATL7 298 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 E9PQ18 207 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 HOXC11O43248 304 aaPredicted RBP3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 WDHD1O75717 1129 aaPredicted RBP3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 SLC25A12O75746 678 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 KCNK5O95279 499 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 MLYCDO95822 493 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 F9P00740 461 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 TPM2P07951 284 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 FAM157CP0CG43 387 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 ANXA7P20073 488 aaKnown RBP3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 AZU1P20160 251 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 EPHA2P29317 976 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 CD81P60033 236 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 AIMP1Q12904 312 aaKnown RBP3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 CCNG2Q16589 344 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 CCL15Q16663 113 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 UGP2Q16851 508 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 FKBP1CQ5VVH2 108 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 FAM109BQ6ICB4 259 aaPredicted RBP3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 ISCA2Q86U28 154 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 CERS3Q8IU89 383 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 CERS5Q8N5B7 392 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 GCSAMQ8N6F7 178 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 OPTNQ96CV9 577 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 SYT11Q9BT88 431 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 ANKRD2Q9GZV1 360 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 PDCL3Q9H2J4 239 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 PIGMQ9H3S5 423 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 MYH16Q9H6N6 1097 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 MTMR10Q9NXD2 777 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 CWC25Q9NXE8 425 aaPredicted RBP3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 ABI3Q9P2A4 366 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 CLIC4Q9Y696 253 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 CYP46A1Q9Y6A2 500 aa3.01□□□□□ -1.93
AC007879.3-202ENST00000448786 KIF16BQ96L93 1317 aa3□□□□□ -1.93
AC007879.3-202ENST00000448786 ATP2A1O14983 1001 aa3□□□□□ -1.93
AC007879.3-202ENST00000448786 ZBTB43O43298 467 aa3□□□□□ -1.93
AC007879.3-202ENST00000448786 GPR137BO60478 399 aa3□□□□□ -1.93
AC007879.3-202ENST00000448786 SEC14L2O76054 403 aa3□□□□□ -1.93
AC007879.3-202ENST00000448786 CSPG5O95196 566 aa3□□□□□ -1.93
AC007879.3-202ENST00000448786 HSP90AA1P07900 732 aaKnown RBP3□□□□□ -1.93
AC007879.3-202ENST00000448786 ZNF853P0CG23 659 aa3□□□□□ -1.93
AC007879.3-202ENST00000448786 ABCD3P28288 659 aa3□□□□□ -1.93
AC007879.3-202ENST00000448786 HOXD10P28358 340 aa3□□□□□ -1.93
AC007879.3-202ENST00000448786 F2RL1P55085 397 aa3□□□□□ -1.93
AC007879.3-202ENST00000448786 RIPK4P57078 832 aa3□□□□□ -1.93
AC007879.3-202ENST00000448786 UBXN2AP68543 259 aa3□□□□□ -1.93
AC007879.3-202ENST00000448786 MRPS34P82930 218 aaKnown RBP3□□□□□ -1.93
AC007879.3-202ENST00000448786 LRMPQ12912 555 aa3□□□□□ -1.93
AC007879.3-202ENST00000448786 PPIL2Q13356 520 aa3□□□□□ -1.93
AC007879.3-202ENST00000448786 VGLL4Q14135 290 aa3□□□□□ -1.93
AC007879.3-202ENST00000448786 FRG1Q14331 258 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms