RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 CCDC138Q96M89 665 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 GPATCH1Q9BRR8 931 aaKnown RBP17.25■□□□□ 0.35
LMNA-208ENST00000448611 ANGPTL2Q9UKU9 493 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 GPR34Q9UPC5 381 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 SPTBN5Q9NRC6 3674 aaKnown RBP17.25■□□□□ 0.35
LMNA-208ENST00000448611 C17orf113A0A1B0GUU1 675 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 A0A1W2PP18 115 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 H3BM21 787 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 VEGFDO43915 354 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 PRAMEF4O60810 478 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 IL12AP29459 219 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 MSX2P35548 267 aaPredicted RBP17.25■□□□□ 0.35
LMNA-208ENST00000448611 BDKRB1P46663 353 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 GTF2H3Q13889 308 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 CPSF6Q16630 551 aaKnown RBP eCLIP17.25■□□□□ 0.35
LMNA-208ENST00000448611 SMU1Q2TAY7 513 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 PRAMEF9Q5VWM5 478 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 PNCKQ6P2M8 343 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 CFAP206Q8IYR0 622 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 CSGALNACT1Q8TDX6 532 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 SPDL1Q96EA4 605 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 ACTL8Q9H568 366 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 TMEM181Q9P2C4 612 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 STOX2Q9P2F5 926 aaPredicted RBP17.25■□□□□ 0.35
LMNA-208ENST00000448611 ZNHIT2Q9UHR6 403 aa17.25■□□□□ 0.35
LMNA-208ENST00000448611 FAM234BA2RU67 622 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 ASPDHA6ND91 283 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 FXYD1O00168 92 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 ACOT8O14734 319 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 ANKRD28O15084 1053 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 KRT6AP02538 564 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 KRT6BP04259 564 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 G6PDP11413 515 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 KRT6CP48668 564 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 POLR2JP52435 117 aaKnown RBP17.24■□□□□ 0.35
LMNA-208ENST00000448611 KCNK10P57789 538 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 HMGCS1Q01581 520 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 SKIV2LQ15477 1246 aaKnown RBP17.24■□□□□ 0.35
LMNA-208ENST00000448611 SGO1Q5FBB7 561 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 IL23RQ5VWK5 629 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 CYP20A1Q6UW02 462 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 LRRC74BQ6ZQY2 392 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 KLHDC8AQ8IYD2 350 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 RGL4Q8IZJ4 473 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 HDDC3Q8N4P3 179 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 SMRP1Q8NCR6 262 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 ATL1Q8WXF7 558 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 SLC39A3Q9BRY0 314 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 CD300AQ9UGN4 299 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 TICRRQ7Z2Z1 1910 aa17.24■□□□□ 0.35
LMNA-208ENST00000448611 ZFC3H1O60293 1989 aaKnown RBP17.24■□□□□ 0.35
LMNA-208ENST00000448611 A0A1W2PP55 124 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 POP7O75817 140 aaKnown RBP17.23■□□□□ 0.35
LMNA-208ENST00000448611 BCAS2O75934 225 aaPredicted RBP17.23■□□□□ 0.35
LMNA-208ENST00000448611 RPS14P62263 151 aaKnown RBP17.23■□□□□ 0.35
LMNA-208ENST00000448611 FLOT2Q14254 428 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 AGERQ15109 404 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 AAK1Q2M2I8 961 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 WSCD2Q2TBF2 565 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 SLC44A4Q53GD3 710 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 ZNF776Q68DI1 518 aaPredicted RBP17.23■□□□□ 0.35
LMNA-208ENST00000448611 KIAA1211LQ6NV74 962 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 AGTRAPQ6RW13 159 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 C11orf96Q7Z7L8 435 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 MINDY1Q8N5J2 469 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 FBXO15Q8NCQ5 510 aaPredicted RBP17.23■□□□□ 0.35
LMNA-208ENST00000448611 FAM156AQ8NDB6 213 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 FOPNLQ96NB1 174 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 NECTIN4Q96NY8 510 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 PKP4Q99569 1192 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 HOPXQ9BPY8 73 aaPredicted RBP17.23■□□□□ 0.35
LMNA-208ENST00000448611 MRPL40Q9NQ50 206 aaKnown RBP17.23■□□□□ 0.35
LMNA-208ENST00000448611 INTS7Q9NVH2 962 aaKnown RBP17.23■□□□□ 0.35
LMNA-208ENST00000448611 SUCOQ9UBS9 1254 aaKnown RBP17.23■□□□□ 0.35
LMNA-208ENST00000448611 POLR3HQ9Y535 204 aaPredicted RBP17.23■□□□□ 0.35
LMNA-208ENST00000448611 PRORSD1PA6NEY8 169 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 MAP3K7O43318 606 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 EEDO75530 441 aaKnown RBP17.23■□□□□ 0.35
LMNA-208ENST00000448611 PCDH8O95206 1070 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 C1orf105O95561 183 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 PDYNP01213 254 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 SLC2A4P14672 509 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 VHLP40337 213 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 GNPDA1P46926 289 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 RPL38P63173 70 aaKnown RBP17.23■□□□□ 0.35
LMNA-208ENST00000448611 COL19A1Q14993 1142 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 SWT1Q5T5J6 900 aaKnown RBP17.23■□□□□ 0.35
LMNA-208ENST00000448611 CRTC3Q6UUV7 619 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 RNF111Q6ZNA4 994 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 HEATR4Q86WZ0 1026 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 ZFAND4Q86XD8 727 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 OR2T3Q8NH03 318 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 OR2L2Q8NH16 312 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 VPS33AQ96AX1 596 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 ASB9Q96DX5 294 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 GABRG3Q99928 467 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 ACPTQ9BZG2 426 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 SNX6Q9UNH7 406 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 TMEM98Q9Y2Y6 226 aa17.23■□□□□ 0.35
LMNA-208ENST00000448611 PCYT1BQ9Y5K3 369 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms