RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 EIF3LQ9Y262 564 aaKnown RBP16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 SCN8AQ9UQD0 1980 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 ETS2P15036 469 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 GRIA2P42262 883 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 GNPDA1P46926 289 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 NRIP1P48552 1158 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 EPHA5P54756 1037 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 PGS1Q32NB8 556 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 ADCY4Q8NFM4 1077 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 FIG4Q92562 907 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 ABCD2Q9UBJ2 740 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 TMCO1Q9UM00 188 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 GON4LQ3T8J9 2241 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 AGAP14A8MT82 685 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 AXIN1O15169 862 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 PRAMEF4O60810 478 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 SEC24DO94855 1032 aaPredicted RBP16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 CLIC3O95833 236 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 VARSP26640 1264 aaKnown RBP16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 PSMD8P48556 350 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 TRAP1Q12931 704 aaKnown RBP16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 PPP1R8Q12972 351 aaKnown RBP16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 PRAMEF9Q5VWM5 478 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 CBR4Q8N4T8 237 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 RASGEF1AQ8N9B8 481 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 RNF145Q96MT1 663 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 SLC32A1Q9H598 525 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 IKZF5Q9H5V7 419 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 RPF2Q9H7B2 306 aaKnown RBP16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 ZIM2Q9NZV7 527 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 TRIOO75962 3097 aa16.4■□□□□ 0.22
LAPTM4B-201ENST00000445593 RNF103-CHMP3A0A140T963 221 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 AHCYL1O43865 530 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 IMPDH2P12268 514 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 CHN2P52757 468 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 ROR2Q01974 943 aaKnown RBP16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 CHIT1Q13231 466 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 TMEM220Q6QAJ8 160 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 CRTC3Q6UUV7 619 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 TRAPPC5Q8IUR0 188 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 OR10A6Q8NH74 314 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 PPP3R2Q96LZ3 170 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 ZBTB18Q99592 522 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 SOX17Q9H6I2 414 aaPredicted RBP16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 GALNT8Q9NY28 637 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 MMP20O60882 483 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 ZNF26P17031 533 aaPredicted RBP16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 NAE1Q13564 534 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 INPP5AQ14642 412 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 ZNF805Q5CZA5 627 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 C9orf50Q5SZB4 431 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 PRMT9Q6P2P2 845 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 DOK6Q6PKX4 331 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 ST13P4Q8IZP2 240 aaPredicted RBP16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 ASB11Q8WXH4 323 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 CENPKQ9BS16 269 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 SLC6A13Q9NSD5 602 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 CCL27Q9Y4X3 112 aa16.39■□□□□ 0.21
LAPTM4B-201ENST00000445593 CARNS1A5YM72 827 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 PLOD2O00469 737 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 PFDN1O60925 122 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 OR6B1O95007 311 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 C1QCP02747 245 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 FESP07332 822 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 MAPKAPK3Q16644 382 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 GPR65Q8IYL9 337 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 MCOLN3Q8TDD5 553 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 SLC13A3Q8WWT9 602 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 ABTB1Q969K4 478 aaPredicted RBP16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 TMEM159Q96B96 161 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 APIPQ96GX9 242 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 VPS50Q96JG6 964 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 CENPOQ9BU64 300 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 PRR23AA6NEV1 266 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 IFRD1O00458 451 aaPredicted RBP16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 SGTAO43765 313 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 BCKDHAP12694 445 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 IL10P22301 178 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 DDX6P26196 483 aaKnown RBP eCLIP16.38■□□□□ 0.212e-17■■■□□ 18.7
LAPTM4B-201ENST00000445593 MAP4P27816 1152 aaKnown RBP16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 FAM78AQ5JUQ0 283 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 CACHD1Q5VU97 1274 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 ANKRD26P1Q6NSI1 321 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 UGT2A3Q6UWM9 527 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 LIPIQ6XZB0 460 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 MMAAQ8IVH4 418 aaKnown RBP16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 FBXO30Q8TB52 745 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 OR52E6Q96RD3 313 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 CGREF1Q99674 301 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 OR2AG1Q9H205 316 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 HEBP1Q9NRV9 189 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 OAZ3Q9UMX2 235 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 NUMA1Q14980 2115 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 BRWD1Q9NSI6 2320 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 ARHGEF33A8MVX0 844 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 KRT6AP02538 564 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 KRT6BP04259 564 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 EBLN1P0CF75 366 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 CYP2A7P20853 494 aa16.38■□□□□ 0.21
LAPTM4B-201ENST00000445593 KRT6CP48668 564 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms