RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 OR4E2Q8NGC2 313 aa17.18■□□□□ 0.34
CCDC188-201ENST00000439765 OR52E1Q8NGJ3 308 aa17.18■□□□□ 0.34
CCDC188-201ENST00000439765 CFAP61Q8NHU2 1237 aa17.18■□□□□ 0.34
CCDC188-201ENST00000439765 SKA2Q8WVK7 121 aaPredicted RBP17.18■□□□□ 0.34
CCDC188-201ENST00000439765 LCN9Q8WX39 176 aa17.18■□□□□ 0.34
CCDC188-201ENST00000439765 CDKL2Q92772 493 aa17.18■□□□□ 0.34
CCDC188-201ENST00000439765 CCDC68Q9H2F9 335 aa17.18■□□□□ 0.34
CCDC188-201ENST00000439765 TRIT1Q9H3H1 467 aaKnown RBP17.18■□□□□ 0.34
CCDC188-201ENST00000439765 CPNE5Q9HCH3 593 aa17.18■□□□□ 0.34
CCDC188-201ENST00000439765 TDRKHQ9Y2W6 561 aaKnown RBP17.18■□□□□ 0.34
CCDC188-201ENST00000439765 CXorf49A8MYA2 514 aaPredicted RBP17.17■□□□□ 0.34
CCDC188-201ENST00000439765 KIF1CO43896 1103 aaKnown RBP17.17■□□□□ 0.34
CCDC188-201ENST00000439765 CHRM3P20309 590 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 RHDQ02161 417 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 VAC14Q08AM6 782 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 CASP8Q14790 479 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 ZNF549Q6P9A3 640 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 ARHGAP22Q7Z5H3 698 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 CNTN4Q8IWV2 1026 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 C2CD4AQ8NCU7 369 aaPredicted RBP17.17■□□□□ 0.34
CCDC188-201ENST00000439765 OR5K2Q8NHB8 316 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 ZFPM2Q8WW38 1151 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 PMEPA1Q969W9 287 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 ZDHHC12Q96GR4 267 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 CCDC77Q9BR77 488 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 SRMSQ9H3Y6 488 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 XKR8Q9H6D3 395 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 HRASLS2Q9NWW9 162 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 OCIAD1Q9NX40 245 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 ZFATQ9P243 1243 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 GALPQ9UBC7 116 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 CIDEBQ9UHD4 219 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 PLAGL1Q9UM63 463 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 ZNF462Q96JM2 2506 aa17.17■□□□□ 0.34
CCDC188-201ENST00000439765 EFCAB7A8K855 629 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 ERVH48-1M5A8F1 160 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 KPNA5O15131 536 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 PIAS1O75925 651 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 HAUS5O94927 633 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 SLCO2B1O94956 709 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 SHBGP04278 402 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 FGF3P11487 239 aaPredicted RBP17.16■□□□□ 0.34
CCDC188-201ENST00000439765 POLR2CP19387 275 aaPredicted RBP17.16■□□□□ 0.34
CCDC188-201ENST00000439765 SEPHS1P49903 392 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 ABRQ12979 859 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 CLN3Q13286 438 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 KLHL38Q2WGJ6 581 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 ARMC6Q6NXE6 501 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 PCSK4Q6UW60 755 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 HDXQ7Z353 690 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 SPNS2Q8IVW8 549 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 TBC1D21Q8IYX1 336 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 ZBTB2Q8N680 514 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 PPM1NQ8N819 430 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 GABPB2Q8TAK5 448 aaPredicted RBP17.16■□□□□ 0.34
CCDC188-201ENST00000439765 NDNQ99608 321 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 ICKQ9UPZ9 632 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 PLAAQ9Y263 795 aa17.16■□□□□ 0.34
CCDC188-201ENST00000439765 EXOC1LA0A1B0GW35 172 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 GSAPA4D1B5 854 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 NVLO15381 856 aaKnown RBP17.15■□□□□ 0.34
CCDC188-201ENST00000439765 ANKRD34CP0C6C1 535 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 SLC5A2P31639 672 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 NAB1Q13506 487 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 EFTUD2Q15029 972 aaKnown RBP eCLIP17.15■□□□□ 0.34
CCDC188-201ENST00000439765 PLEKHS1Q5SXH7 462 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 ARHGAP40Q5TG30 622 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 CACHD1Q5VU97 1274 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 CTAGE3PQ8IX95 158 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 SIDT2Q8NBJ9 832 aaKnown RBP17.15■□□□□ 0.34
CCDC188-201ENST00000439765 GIMAP7Q8NHV1 300 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 USP7Q93009 1102 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 WBP1Q96G27 269 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 SLC30A3Q99726 388 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 NSMCE4AQ9NXX6 385 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 EPHA6Q9UF33 1036 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 FETUBQ9UGM5 382 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 MED16Q9Y2X0 877 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 NFS1Q9Y697 457 aa17.15■□□□□ 0.34
CCDC188-201ENST00000439765 K7ENP7 123 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 BTN3A1O00481 513 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 PRAMEF10O60809 474 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 C1QL1O75973 258 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 BDKRB1P46663 353 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 CLCN7P51798 805 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 PRKAA1Q13131 559 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 INO80CQ6PI98 192 aaPredicted RBP17.14■□□□□ 0.33
CCDC188-201ENST00000439765 KIAA0408Q6ZU52 694 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 PRSS42Q7Z5A4 293 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 SLC26A11Q86WA9 606 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 AMIGO1Q86WK6 493 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 DCUN1D3Q8IWE4 304 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 BMPERQ8N8U9 685 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 OR2W6PQ8NHA6 318 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 KCNJ9Q92806 393 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 ZIM3Q96PE6 472 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 MAP3K3Q99759 626 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 RAB33BQ9H082 229 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 ZNF768Q9H5H4 540 aaKnown RBP17.14■□□□□ 0.33
CCDC188-201ENST00000439765 TFB2MQ9H5Q4 396 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms