RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 OR5K1Q8NHB7 308 aa16.04■□□□□ 0.16
CLCNKA-203ENST00000439316 FKBP10Q96AY3 582 aa16.04■□□□□ 0.16
CLCNKA-203ENST00000439316 CEP295NLQ96MC4 621 aa16.04■□□□□ 0.16
CLCNKA-203ENST00000439316 GPR63Q9BZJ6 419 aa16.04■□□□□ 0.16
CLCNKA-203ENST00000439316 CD244Q9BZW8 370 aa16.04■□□□□ 0.16
CLCNKA-203ENST00000439316 FARSBQ9NSD9 589 aaKnown RBP16.04■□□□□ 0.16
CLCNKA-203ENST00000439316 OPTCQ9UBM4 332 aa16.04■□□□□ 0.16
CLCNKA-203ENST00000439316 TRPS1Q9UHF7 1281 aa16.04■□□□□ 0.16
CLCNKA-203ENST00000439316 PCDHB9Q9Y5E1 797 aa16.04■□□□□ 0.16
CLCNKA-203ENST00000439316 FFAR3O14843 346 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 GPR42O15529 346 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 TSPAN3O60637 253 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 SYN1P17600 705 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 CA5AP35218 305 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 GNPDA1P46926 289 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 PIK3CGP48736 1102 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 TPD52P55327 224 aaPredicted RBP16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 HMGCS1Q01581 520 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 PON2Q15165 354 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 PHKG1Q16816 387 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 IMPG1Q17R60 797 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 TMEM240Q5SV17 173 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 HECTD3Q5T447 861 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 ADGRF1Q5T601 910 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 ATG9BQ674R7 924 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 ANKRD34AQ69YU3 496 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 C16orf87Q6PH81 154 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 SPESP1Q6UW49 350 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 SUSD1Q6UWL2 747 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 DNAJC14Q6Y2X3 702 aaPredicted RBP16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 DDX53Q86TM3 631 aaKnown RBP16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 CALHM3Q86XJ0 350 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 ZCCHC7Q8N3Z6 543 aaKnown RBP16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 SLC15A4Q8N697 577 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 AUTS2Q8WXX7 1259 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 OVCA2Q8WZ82 227 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 HERC2P3Q9BVR0 1158 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 BOCQ9BWV1 1114 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 KAT8Q9H7Z6 458 aaKnown RBP16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 LRTM1Q9HBL6 345 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 DCAF13Q9NV06 445 aaKnown RBP16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 WWOXQ9NZC7 414 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 KLQ9UEF7 1012 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 ANGPTL3Q9Y5C1 460 aa16.03■□□□□ 0.16
CLCNKA-203ENST00000439316 MANBAO00462 879 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 PRAMEF1O95521 474 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 IL1RNP18510 177 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 ITGB6P18564 788 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 DGKAP23743 735 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 DCTP40126 519 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 CD97P48960 835 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 MLLT10P55197 1068 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 DPY19L1Q2PZI1 675 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 GTDC1Q4AE62 458 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 ZNF691Q5VV52 312 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 METTL2BQ6P1Q9 378 aaKnown RBP16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 GALNT18Q6P9A2 607 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 FAM151BQ6UXP7 276 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 ZNF783Q6ZMS7 281 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 TMEM179BQ7Z7N9 219 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 ADHFE1Q8IWW8 467 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 RBFAQ8N0V3 343 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 EID3Q8N140 333 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 KRTCAP2Q8N6L1 136 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 CHPT1Q8WUD6 406 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 USP7Q93009 1102 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 MYO19Q96H55 970 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 CPPED1Q9BRF8 314 aaPredicted RBP16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 TBCDQ9BTW9 1192 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 NTMT1Q9BV86 223 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 ZNF106Q9H2Y7 1883 aaKnown RBP16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 RAD21L1Q9H4I0 556 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 ZFP14Q9HCL3 533 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 INVSQ9Y283 1065 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 B3GNT3Q9Y2A9 372 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 CORINQ9Y5Q5 1042 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 PRSS21Q9Y6M0 314 aa16.02■□□□□ 0.16
CLCNKA-203ENST00000439316 K7EPI3 171 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 GNGT2O14610 69 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 ULK1O75385 1050 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 CREG1O75629 220 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 DNAJB5O75953 348 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 SEC24AO95486 1093 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 URODP06132 367 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 ALPIP09923 528 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 EBLN1P0CF75 366 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 CTPS1P17812 591 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 ITIH1P19827 911 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 GDF5P43026 501 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 GZMMP51124 257 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 ISL1P61371 349 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 RHOAP61586 193 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 HTRA4P83105 476 aaPredicted RBP16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 USP39Q53GS9 565 aaKnown RBP16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 INO80DQ53TQ3 878 aaPredicted RBP16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 SLC16A12Q6ZSM3 486 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 RGL4Q8IZJ4 473 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 CENPSQ8N2Z9 138 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 DNAJB8Q8NHS0 232 aa16.02■□□□□ 0.15
CLCNKA-203ENST00000439316 ZNF461Q8TAF7 563 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms