RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 ZNF449Q6P9G9 518 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 MED25Q71SY5 747 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 ZNF534Q76KX8 674 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 KIAA1328Q86T90 577 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 HOOK3Q86VS8 718 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 RAB43Q86YS6 212 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 GPR135Q8IZ08 494 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 C2orf73Q8N5S3 287 aaPredicted RBP17.51■□□□□ 0.39
GTF3A-204ENST00000438571 TTC13Q8NBP0 860 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 N4BP2L2Q92802 583 aaPredicted RBP17.51■□□□□ 0.39
GTF3A-204ENST00000438571 HDAC10Q969S8 669 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 C19orf60Q96EN9 201 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 MRFAP1L1Q96HT8 127 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 CALR3Q96L12 384 aaKnown RBP17.51■□□□□ 0.39
GTF3A-204ENST00000438571 IL17FQ96PD4 163 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 SMAD5Q99717 465 aaKnown RBP17.51■□□□□ 0.39
GTF3A-204ENST00000438571 PCDHGB7Q9Y5F8 929 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 CNTRLQ7Z7A1 2325 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 SVILO95425 2214 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 IQCF5A8MTL0 148 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 ISM1B1AKI9 464 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 GSTM1P09488 218 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 ETS1P14921 441 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 MAGP20916 626 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 CCR7P32248 378 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 GSTM4Q03013 218 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 EIF2S3LQ2VIR3 472 aaKnown RBP17.5■□□□□ 0.39
GTF3A-204ENST00000438571 LDB1Q86U70 411 aaPredicted RBP17.5■□□□□ 0.39
GTF3A-204ENST00000438571 TAX1BP1Q86VP1 789 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 DNAJC22Q8N4W6 341 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 LINC01555Q8NAE3 123 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 TCTN2Q96GX1 697 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 SGSM3Q96HU1 749 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 DPH2Q9BQC3 489 aaPredicted RBP17.5■□□□□ 0.39
GTF3A-204ENST00000438571 DHRS4Q9BTZ2 278 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 MENTQ9BUN1 341 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 ETNK1Q9HBU6 452 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 SLAMF7Q9NQ25 335 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 SLC22A11Q9NSA0 550 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 MAP10Q9P2G4 905 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 PLEKHB1Q9UF11 243 aaPredicted RBP17.5■□□□□ 0.39
GTF3A-204ENST00000438571 PADI2Q9Y2J8 665 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 CROCCQ5TZA2 2017 aa17.5■□□□□ 0.39
GTF3A-204ENST00000438571 ZSCAN9O15535 394 aaPredicted RBP17.49■□□□□ 0.39
GTF3A-204ENST00000438571 MAP3K7O43318 606 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 ALOX12BO75342 701 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 UMODP07911 640 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 HBQ1P09105 142 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 ITGAXP20702 1163 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 PKLRP30613 574 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 FOLR3P41439 243 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 RRADP55042 308 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 GRB7Q14451 532 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 TSTD2Q5T7W7 516 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 MRPL14Q6P1L8 145 aaKnown RBP17.49■□□□□ 0.39
GTF3A-204ENST00000438571 PPP1R32Q7Z5V6 425 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 KRT222Q8N1A0 295 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 UBL4BQ8N7F7 174 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 DNAAF3Q8N9W5 541 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 INPP5DQ92835 1189 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.49■□□□□ 0.39
GTF3A-204ENST00000438571 PNPLA2Q96AD5 504 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 ALS2CR12Q96Q35 445 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 AP1M1Q9BXS5 423 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 ZBTB20Q9HC78 741 aaPredicted RBP17.49■□□□□ 0.39
GTF3A-204ENST00000438571 OR6C2Q9NZP2 312 aa17.49■□□□□ 0.39
GTF3A-204ENST00000438571 A1L4Q6 167 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 KRT87PA6NCN2 255 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 MIF4GDA9UHW6 222 aaKnown RBP17.48■□□□□ 0.39
GTF3A-204ENST00000438571 QSOX1O00391 747 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 OR56A5P0C7T3 313 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 GCGRP47871 477 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 CDH17Q12864 832 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 OASLQ15646 514 aaKnown RBP17.48■□□□□ 0.39
GTF3A-204ENST00000438571 KCTD19Q17RG1 926 aaPredicted RBP17.48■□□□□ 0.39
GTF3A-204ENST00000438571 SLC5A12Q1EHB4 618 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 PLEKHN1Q494U1 663 aaPredicted RBP17.48■□□□□ 0.39
GTF3A-204ENST00000438571 AFTPHQ6ULP2 937 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 DTWD1Q8N5C7 304 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 PROKR1Q8TCW9 393 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 SSC4DQ8WTU2 575 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 HES6Q96HZ4 224 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 CHRNA10Q9GZZ6 450 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 CASS4Q9NQ75 786 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 IRAK4Q9NWZ3 460 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 IFT80Q9P2H3 777 aaPredicted RBP17.48■□□□□ 0.39
GTF3A-204ENST00000438571 NDOR1Q9UHB4 597 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 POLG2Q9UHN1 485 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 GPN3Q9UHW5 284 aaPredicted RBP17.48■□□□□ 0.39
GTF3A-204ENST00000438571 AP1M2Q9Y6Q5 423 aa17.48■□□□□ 0.39
GTF3A-204ENST00000438571 DIDO1Q9BTC0 2240 aaKnown RBP17.47■□□□□ 0.39
GTF3A-204ENST00000438571 PSMD3O43242 534 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 LIASO43766 372 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 ZNF189O75820 626 aaPredicted RBP17.47■□□□□ 0.39
GTF3A-204ENST00000438571 IFNB1P01574 187 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 MCM3P25205 808 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 DCDP81605 110 aaKnown RBP17.47■□□□□ 0.39
GTF3A-204ENST00000438571 ACVR1Q04771 509 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 HSPA14Q0VDF9 509 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 SSPNQ14714 243 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms